{"id":5646,"date":"2023-09-04T03:15:04","date_gmt":"2023-09-04T03:15:04","guid":{"rendered":"https:\/\/cm.vastapps.dev\/tcia-collection\/pelvic-reference-data\/"},"modified":"2023-09-13T12:01:20","modified_gmt":"2023-09-13T12:01:20","slug":"pelvic-reference-data","status":"publish","type":"tcia_collection","link":"https:\/\/cm.vastapps.dev\/tcia-collection\/pelvic-reference-data\/","title":{"rendered":"PELVIC-REFERENCE-DATA"},"featured_media":8057,"template":"","citation-tax":[],"cancer_types":["Prostate","Anal"],"citations":[4568,4569,2925],"collection_doi":"10.7937\/TCIA.2019.WOSKQ5OO","collection_download_info":"Click the Versions tab for more info about data releases.","collection_downloads":[5168,5169,5170],"full_export":"<h2 id=\"PelvicReferenceData-Summary\">Summary<\/h2><div class=\"wiki-content\"><p><br\/><\/p><strong>Purpose:<\/strong> Expert selected landmark points on clinical image pairs provide a basis for rigid registration validation. Using combinatorial rigid registration optimization (CORRO) we provide a statistically characterized reference data set for image registration of the pelvis by estimating the optimal ground truth.<\/p><p><strong>Methods:<\/strong> Landmark points for each CT\/CBCT image pair for 58 pelvic cases were identified. From the identified landmark pairs, combination subsets of k-number of landmark pairs were generated without repeat, to form a k-set for k=4, 8, &amp;12. An affine registration between the image pairs was calculated for each k-combination set (2,000-8,000,000). The mean and the standard deviation of the registration were used as the final registration for each image pair. Joint entropy was employed to measure and compare the quality of CORRO to commercially available software.<\/p><p><strong>Results: <\/strong>An average of 154 (range: 91-212) landmark pairs were selected for each CT\/CBCT image pair. The mean standard deviation of the registration output decreased as the k-size increased for all cases.\u00a0 In general the joint entropy evaluated was found to be lower than results from commercially available software. Of all 58 cases 58.3% of the k=4, 15% of k=8 and 18.3% of k=12 resulted in the better registration using CORRO as compared to 8.3% from a commercial registration software. The minimum joint entropy was determined for one case and found to exist at the estimated registration mean in agreement with the CORRO approach.<\/p><p><strong>Conclusion:<\/strong> The results demonstrate that CORRO works even in the extreme case of the pelvic anatomy where the CBCT suffers from reduced quality due to increased noise levels. The estimated ground truth using CORRO was found to be better than commercially available software for all k-sets tested. Additionally, the k-set of 4 resulted in overall best outcomes when compared to k=8 and 12, which is anticipated because k=8 and 12 are more likely to have combinations that affected the accuracy of the registration.<p><span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\"><img class=\"confluence-embedded-image confluence-content-image-border\" draggable=\"false\" height=\"492\" width=\"632\" src=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/embedded-page\/Public\/Pelvic-Reference-Data\/image2019-10-1_12-43-49.png?api=v2\"><\/span><\/p><p>Figure 1. Content of planning CT shifted to the machine isocenter. Top left to right - axial, coronal and sagittal planning CT image with machine isocenter in red and image isocenter in blue. Middle left to right - axial, coronal and sagittal planning CT at machine isocenter. Bottom left to right - axial, coronal and sagittal CBCT at machine isocenter.<\/p><p><span style=\"font-size: 16.0px;font-weight: bold;\">Acknowledgements<\/span><\/p><p>We would like to acknowledge the individuals and institutions that have provided data for this collection:<\/p><ul><li><p><span>Beaumont Health : Afua Yorke, Gary McDonald, David Solis, Thomas Guerrero.\u00a0 We thank Beaumont Hospital Royal Oak MI, for their support. And thanks to Charles K. Yorke, Ph.D., and Brad J. Roth Ph.D.<\/span><\/p><\/li><\/ul><p><br\/><\/p><div class=\"tab-style-builtin\"><div class=\"localtabs-macro\"><div class=\"aui-tabs horizontal-tabs\" role=\"application\" data-aui-responsive=\"true\"><ul class=\"tabs-menu\"><li class=\"menu-item bv-localtab  active-tab \"><a href=\"#59310517c2f9de15969948699e0f76d5b2ac907b\"><strong>Data Access<\/strong><\/a> <\/li><li class=\"menu-item bv-localtab \"><a href=\"#59310517ec636883d9e8468c9c2876a4683d49c7\"><strong>Detailed Description<\/strong><\/a> <\/li><li class=\"menu-item bv-localtab \"><a href=\"#59310517ae5e50a8c044429789ed53e4076c650d\"><strong>Citations &amp; Data Usage Policy<\/strong><\/a> <\/li><li class=\"menu-item bv-localtab \"><a href=\"#59310517d058af732ab94784ab9697fb523587ee\"><strong>Versions<\/strong><\/a> <\/li><\/ul><div class=\"tabs-pane  active-pane \" id=\"59310517c2f9de15969948699e0f76d5b2ac907b\" active=\"true\" name=\"Data Access\" ><h3 id=\"PelvicReferenceData-DataAccess\">Data Access<\/h3><div class=\"table-wrap\"><table class=\"wrapped relative-table confluenceTable\" style=\"width: 74.9873%;\"><colgroup><col style=\"width: 37.7478%;\"\/><col style=\"width: 30.5726%;\"\/><col style=\"width: 31.6761%;\"\/><\/colgroup><tbody><tr><th class=\"confluenceTh\">Data Type<\/th><th class=\"confluenceTh\">Download all or Query\/Filter<\/th><th class=\"confluenceTh\">License<\/th><\/tr><tr><td class=\"confluenceTd\"><span>Images (DICOM, 7 GB)<\/span><\/td><td class=\"confluenceTd\"><div class=\"content-wrapper\"><p>\n\n<span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\">\n   <a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/59310517\/TCIA-Pelvic-Reference-Data.tcia?version=1&amp;modificationDate=1568393224796&amp;api=v2\" rel=\"nofollow\"><button class=\"tcia-btn tcia-download-color\"><i class=\"fa fa-cloud-download\" \/> Download<\/button><\/a>\u00a0\n<\/span>\n\n<span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\">\n   <a href=\"https:\/\/nbia.cancerimagingarchive.net\/nbia-search\/?MinNumberOfStudiesCriteria=1&amp;CollectionCriteria=Pelvic-Reference-Data\" class=\"external-link\" rel=\"nofollow\"><button class=\"tcia-btn tcia-search-color\"><i class=\"fa fa-search\" \/> Search<\/button><\/a>\u00a0\n<\/span><span style=\"letter-spacing: 0.0px;\">(Download requires the\u00a0<\/span><a href=\"https:\/\/wiki.cancerimagingarchive.net\/display\/NBIA\/Downloading+TCIA+Images\" style=\"letter-spacing: 0.0px;\" rel=\"nofollow\">NBIA Data Retriever<\/a><span style=\"letter-spacing: 0.0px;\">)<\/span><\/p><\/div><\/td><td class=\"confluenceTd\"><div class=\"content-wrapper\"><p class=\"auto-cursor-target\">\n<a href=\"https:\/\/creativecommons.org\/licenses\/by\/3.0\/\" class=\"external-link\" rel=\"nofollow\">CC BY 3.0<\/a><\/p><\/div><\/td><\/tr><tr><td class=\"confluenceTd\"><span>Transformation Matrices to Isocenter (registration) (XLSX)<\/span><\/td><td class=\"confluenceTd\"><div class=\"content-wrapper\"><p>\n\n<span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\">\n   <a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/59310517\/Isocenter_Coordinates_TCIA.xlsx?version=1&amp;modificationDate=1566315636594&amp;api=v2\" rel=\"nofollow\"><button class=\"tcia-btn tcia-download-color\"><i class=\"fa fa-cloud-download\" \/> Download<\/button><\/a>\u00a0\n<\/span><\/p><\/div><\/td><td class=\"confluenceTd\"><div class=\"content-wrapper\"><p class=\"auto-cursor-target\">\n<a href=\"https:\/\/creativecommons.org\/licenses\/by\/3.0\/\" class=\"external-link\" rel=\"nofollow\">CC BY 3.0<\/a><\/p><\/div><\/td><\/tr><tr><td class=\"confluenceTd\"><span>Landmark Coordinates (Zipped XLSX)<\/span><\/td><td class=\"confluenceTd\"><div class=\"content-wrapper\"><p>\n\n<span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\">\n   <a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/59310517\/Landmark_Coordinates.zip?version=2&amp;modificationDate=1567799673615&amp;api=v2\" rel=\"nofollow\"><button class=\"tcia-btn tcia-download-color\"><i class=\"fa fa-cloud-download\" \/> Download<\/button><\/a>\u00a0\n<\/span><\/p><\/div><\/td><td class=\"confluenceTd\"><div class=\"content-wrapper\"><p class=\"auto-cursor-target\">\n<a href=\"https:\/\/creativecommons.org\/licenses\/by\/3.0\/\" class=\"external-link\" rel=\"nofollow\">CC BY 3.0<\/a><\/p><\/div><\/td><\/tr><\/tbody><\/table><\/div><p>Click the Versions tab for more info about data releases.<\/p><p>\n<h3 id=\"PelvicReferenceData-AdditionalResourcesforthisDataset\">Additional Resources for this Dataset<\/h3>\n<p>The NCI Cancer Research Data Commons (CRDC) provides access to additional data and a cloud-based data science infrastructure that connects data sets with analytics tools to allow users to share, integrate, analyze, and visualize cancer research data.<\/p><\/p><ul><li class=\"auto-cursor-target\"><a href=\"https:\/\/portal.imaging.datacommons.cancer.gov\/explore\/filters\/?collection_id=pelvic_reference_data\" class=\"external-link\" rel=\"nofollow\">Imaging Data Commons (IDC)<\/a> (Imaging Data)<\/li><\/ul><\/div><div class=\"tabs-pane \" id=\"59310517ec636883d9e8468c9c2876a4683d49c7\" name=\"Detailed Description\" ><h3 id=\"PelvicReferenceData-DetailedDescription\">Detailed Description<\/h3><div class=\"table-wrap\"><table class=\"wrapped confluenceTable\"><colgroup><col\/><col\/><\/colgroup><tbody><tr><th class=\"confluenceTh\"><div class=\"tablesorter-header-inner\"><div class=\"tablesorter-header-inner\"><p>Image Statistics<\/p><\/div><\/div><\/th><th class=\"confluenceTh\"><div class=\"tablesorter-header-inner\"><div class=\"tablesorter-header-inner\"><p><br\/><\/p><\/div><\/div><\/th><\/tr><tr><td class=\"confluenceTd\"><p>Modalities<\/p><\/td><td class=\"confluenceTd\"><p>CT<\/p><\/td><\/tr><tr><td class=\"confluenceTd\"><p>Number of Patients<\/p><\/td><td class=\"confluenceTd\"><p>58<\/p><\/td><\/tr><tr><td class=\"confluenceTd\"><p>Number of Studies<\/p><\/td><td class=\"confluenceTd\"><p>116<\/p><\/td><\/tr><tr><td class=\"confluenceTd\"><p>Number of Series<\/p><\/td><td class=\"confluenceTd\"><p>116<\/p><\/td><\/tr><tr><td class=\"confluenceTd\"><p>Number of Images<\/p><\/td><td class=\"confluenceTd\"><p>13,644<\/p><\/td><\/tr><tr><td colspan=\"1\" class=\"confluenceTd\">Images Size (GB)<\/td><td colspan=\"1\" class=\"confluenceTd\">7<\/td><\/tr><\/tbody><\/table><\/div><h3 id=\"PelvicReferenceData-Pleasenote:additionaldatatobringeachpatIDscanintoregistration,andtoco-locatethelandmarks,iscontainedinthetwosetsofExcelsheetsbelow\">Please note: additional data to bring each patID scan into registration, and to co-locate the landmarks, is contained in the two sets of Excel sheets below<\/h3><div class=\"table-wrap\"><table class=\"wrapped confluenceTable\"><colgroup><col\/><col\/><\/colgroup><tbody><tr><td class=\"confluenceTd\"><span>Transformation Matrices to Isocenter (registration) (XLSX)<\/span><\/td><td class=\"confluenceTd\"><div class=\"content-wrapper\"><p>\n\n<span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\">\n   <a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/59310517\/Isocenter_Coordinates_TCIA.xlsx?version=1&amp;modificationDate=1566315636594&amp;api=v2\" rel=\"nofollow\"><button class=\"tcia-btn tcia-download-color\"><i class=\"fa fa-cloud-download\" \/> Download<\/button><\/a>\u00a0\n<\/span><\/p><\/div><\/td><\/tr><tr><td class=\"confluenceTd\"><span>Landmark Coordinates (Zipped XLSX)<\/span><\/td><td class=\"confluenceTd\"><div class=\"content-wrapper\"><p>\n\n<span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\">\n   <a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/59310517\/Landmark_Coordinates.zip?version=2&amp;modificationDate=1567799673615&amp;api=v2\" rel=\"nofollow\"><button class=\"tcia-btn tcia-download-color\"><i class=\"fa fa-cloud-download\" \/> Download<\/button><\/a>\u00a0\n<\/span><\/p><\/div><\/td><\/tr><\/tbody><\/table><\/div><\/div><div class=\"tabs-pane \" id=\"59310517ae5e50a8c044429789ed53e4076c650d\" name=\"Citations BITVOODOO_ANDamp; Data Usage Policy\" ><h3 id=\"PelvicReferenceData-Citations&amp;DataUsagePolicy\">Citations &amp; Data Usage Policy<\/h3><p><span>\n<p>\nUsers must abide by the <a href=\"https:\/\/wiki.cancerimagingarchive.net\/x\/c4hF\" class=\"external-link\" rel=\"nofollow\">TCIA Data Usage Policy and Restrictions<\/a>. Attribution should include references to the following citations:\n<\/p><\/span><\/p><div class=\"confluence-information-macro confluence-information-macro-information\"><p class=\"title\">Data Citation<\/p><span class=\"aui-icon aui-icon-small aui-iconfont-info confluence-information-macro-icon\"><\/span><div class=\"confluence-information-macro-body\"><p><span><span style=\"color: rgb(51,51,51);\">Yorke, A. A., McDonald, G. C., Solis, D., &amp; Guerrero, T. (2019). <strong>Pelvic Reference Data (Version 1) [Data set].<\/strong> The Cancer Imaging Archive. <a href=\"https:\/\/doi.org\/10.7937\/TCIA.2019.WOSKQ5OO\" class=\"external-link\" rel=\"nofollow\">https:\/\/doi.org\/10.7937\/TCIA.2019.WOSKQ5OO<\/a><\/span><\/span><\/p><\/div><\/div><div class=\"confluence-information-macro confluence-information-macro-information\"><p class=\"title\">Publication Citation<\/p><span class=\"aui-icon aui-icon-small aui-iconfont-info confluence-information-macro-icon\"><\/span><div class=\"confluence-information-macro-body\"><p>A. Yorke, A., McDonald, G. C., Solis, D., &amp; Guerrero, T.\u00a0 (2021) <strong>Quality Assurance of Image Registration Using Combinatorial Rigid Registration Optimization (CORRO)<\/strong>. J. Cancer Research and Cellular Therapeutics. 5(2). DOI: <a href=\"https:\/\/doi.org\/10.31579\/2640-1053\/076\" class=\"external-link\" rel=\"nofollow\">https:\/\/doi.org\/10.31579\/2640-1053\/076<\/a><\/p><\/div><\/div><p class=\"auto-cursor-target\"><span style=\"color: rgb(34,34,34);\">\u00a0<\/span><\/p><div class=\"confluence-information-macro confluence-information-macro-information\"><p class=\"title\">TCIA Citation<\/p><span class=\"aui-icon aui-icon-small aui-iconfont-info confluence-information-macro-icon\"><\/span><div class=\"confluence-information-macro-body\"><p><span style=\"letter-spacing: 0.0px;\">Clark, K., Vendt, B., Smith, K., Freymann, J., Kirby, J., Koppel, P., Moore, S., Phillips, S., Maffitt, D., Pringle, M., Tarbox, L., &amp; Prior, F. (2013). <strong>The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository<\/strong>. In Journal of Digital Imaging (Vol. 26, Issue 6, pp. 1045\u20131057). Springer Science and Business Media LLC. <\/span><a style=\"letter-spacing: 0.0px;\" href=\"https:\/\/doi.org\/10.1007\/s10278-013-9622-7\" class=\"external-link\" rel=\"nofollow\">https:\/\/doi.org\/10.1007\/s10278-013-9622-7<\/a><\/p><\/div><\/div><h3 id=\"PelvicReferenceData-AdditionalPublicationResources:\">Additional Publication Resources:<\/h3><p>The Collection authors suggest the below will give context to this dataset:<\/p><ul><li>Yorke, A, Solis, D., Jr. and Guerrero, T. (2020), <strong>A feasibility study to estimate optimal rigid\u2010body registration using combinatorial rigid registration optimization (CORRO)<\/strong>. J. Appl. Clin. Med. Phys., 21: 14-22. <a href=\"https:\/\/doi.org\/10.1002\/acm2.12965\" class=\"external-link\" rel=\"nofollow\">https:\/\/doi.org\/10.1002\/acm2.12965<\/a><\/li><\/ul><h3 id=\"PelvicReferenceData-OtherPublicationsUsingThisData\">Other Publications Using This Data<\/h3><p><span>TCIA maintains <\/span><a href=\"https:\/\/www.cancerimagingarchive.net\/publications\/\" class=\"external-link\" rel=\"nofollow\">a list of publications<\/a><span> which leverage our data. <\/span> If you have a manuscript you'd like to add please <a href=\"http:\/\/www.cancerimagingarchive.net\/support\/\" class=\"external-link\" rel=\"nofollow\">contact TCIA's Helpdesk<\/a>.<\/p><p><br\/><\/p><\/div><div class=\"tabs-pane \" id=\"59310517d058af732ab94784ab9697fb523587ee\" name=\"Versions\" ><h3 id=\"PelvicReferenceData-Version1(Current):Updated2019\/09\/13\">Version 1 (Current): Updated 2019\/09\/13<\/h3><div class=\"table-wrap\"><table class=\"wrapped relative-table confluenceTable\" style=\"width: 39.8827%;\"><colgroup><col style=\"width: 46.9771%;\"\/><col style=\"width: 52.6961%;\"\/><\/colgroup><tbody><tr><th class=\"confluenceTh\"><span>Data Type<\/span><\/th><th class=\"confluenceTh\"><span>Download all or Query\/Filter<\/span><\/th><\/tr><tr><td class=\"confluenceTd\"><span>Images (DICOM, 7 GB)<\/span><\/td><td class=\"confluenceTd\"><div class=\"content-wrapper\"><p>\n\n<span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\">\n   <a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/59310517\/TCIA-Pelvic-Reference-Data.tcia?version=1&amp;modificationDate=1568393224796&amp;api=v2\" rel=\"nofollow\"><button class=\"tcia-btn tcia-download-color\"><i class=\"fa fa-cloud-download\" \/> Download<\/button><\/a>\u00a0\n<\/span>\n\n<span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\">\n   <a href=\"https:\/\/nbia.cancerimagingarchive.net\/nbia-search\/?MinNumberOfStudiesCriteria=1&amp;CollectionCriteria=Pelvic-Reference-Data\" class=\"external-link\" rel=\"nofollow\"><button class=\"tcia-btn tcia-search-color\"><i class=\"fa fa-search\" \/> Search<\/button><\/a>\u00a0\n<\/span><br\/><\/p><p>(Download requires\u00a0the\u00a0<a href=\"https:\/\/wiki.cancerimagingarchive.net\/display\/NBIA\/Downloading+TCIA+Images\" rel=\"nofollow\">NBIA Data Retriever<\/a>)<\/p><\/div><\/td><\/tr><tr><td class=\"confluenceTd\"><span>Transformation Matrices to Isocenter (registration) (XLSX)<\/span><\/td><td class=\"confluenceTd\"><div class=\"content-wrapper\"><p>\n\n<span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\">\n   <a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/59310517\/Isocenter_Coordinates_TCIA.xlsx?version=1&amp;modificationDate=1566315636594&amp;api=v2\" rel=\"nofollow\"><button class=\"tcia-btn tcia-download-color\"><i class=\"fa fa-cloud-download\" \/> Download<\/button><\/a>\u00a0\n<\/span><\/p><\/div><\/td><\/tr><tr><td class=\"confluenceTd\"><span>Landmark Coordinates (Zipped XLSX)<\/span><\/td><td class=\"confluenceTd\"><div class=\"content-wrapper\"><p>\n\n<span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\">\n   <a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/59310517\/Landmark_Coordinates.zip?version=2&amp;modificationDate=1567799673615&amp;api=v2\" rel=\"nofollow\"><button class=\"tcia-btn tcia-download-color\"><i class=\"fa fa-cloud-download\" \/> Download<\/button><\/a>\u00a0\n<\/span><\/p><\/div><\/td><\/tr><\/tbody><\/table><\/div><p><span>Added new subjects.<\/span><\/p><\/div><\/div><\/div><\/div><\/div><p><br\/><\/p><p><br\/><\/p><p><br\/><\/p><p><br\/><\/p><p><br\/><\/p>","versions":false,"additional_resources":"The NCI Cancer Research Data Commons (CRDC) provides access to additional data and a cloud-based data science infrastructure that connects data sets with analytics tools to allow users to share, integrate, analyze, and visualize cancer research data.\n \n<ul><li><a href=\"https:\/\/portal.imaging.datacommons.cancer.gov\/explore\/filters\/?collection_id=pelvic_reference_data\">Imaging Data Commons (IDC)<\/a> (Imaging Data)<\/li><\/ul>","cancer_locations":["Pelvis","Prostate","Anus"],"collection_page_accessibility":"Public","publications_related":"","version_change_log":"","version_change_log_archived":"","analysis_results":"","collection_status":"Complete","publications_using":"TCIA maintains <a href=\"https:\/\/www.cancerimagingarchive.net\/publications\/\">a list of publications<\/a> which leverage our data.  If you have a manuscript you'd like to add please <a href=\"http:\/\/www.cancerimagingarchive.net\/support\/\">contact TCIA's Helpdesk<\/a>.\n<br\/>","species":["Human"],"collection_title":"Pelvic-Reference-Data","detailed_description":"<h3>Please note: additional data to bring each patID scan into registration, and to co-locate the landmarks, is contained in the two sets of Excel sheets below<\/h3>\n<table><colgroup><col\/><col\/><\/colgroup><tbody><tr><td>Transformation Matrices to Isocenter (registration) (XLSX)<\/td><td><div><p>\n<a download=\"\" href=\"\/wp-content\/uploads\/Isocenter_Coordinates_TCIA.xlsx\" target=\"_blank\"><button><i> <\/i> Download<\/button><\/a>\u00a0\n<\/p><\/div><\/td><\/tr><tr><td>Landmark Coordinates (Zipped XLSX)<\/td><td><div><p>\n<a download=\"\" href=\"\/wp-content\/uploads\/Landmark_Coordinates.zip\" target=\"_blank\"><button><i> <\/i> Download<\/button><\/a>\u00a0\n<\/p><\/div><\/td><\/tr><\/tbody><\/table>","related_analysis_results":false,"subjects":"58","collection_short_title":"Pelvic-Reference-Data","data_types":["CT"],"date_updated":"2023-09-13","collection_browse_title":"","supporting_data":["Image Analyses"],"collection_featured_image":{"ID":"8057","post_author":"6","post_date":"2023-09-13 03:53:49","post_date_gmt":"2023-09-13 03:53:49","post_content":"","post_title":"image2019-10-1_12-43-49","post_excerpt":"","post_status":"inherit","comment_status":"open","ping_status":"closed","post_password":"","post_name":"image2019-10-1_12-43-49","to_ping":"","pinged":"","post_modified":"2023-09-13 12:01:21","post_modified_gmt":"2023-09-13 12:01:21","post_content_filtered":"","post_parent":"5646","guid":"https:\/\/cm.vastapps.dev\/wp-content\/uploads\/image2019-10-1_12-43-49.png","menu_order":"0","post_type":"attachment","post_mime_type":"image\/png","comment_count":"0","pod_item_id":"8057"},"collection_summary":"<br\/>\n<strong>Purpose:<\/strong> Expert selected landmark points on clinical image pairs provide a basis for rigid registration validation. Using combinatorial rigid registration optimization (CORRO) we provide a statistically characterized reference data set for image registration of the pelvis by estimating the optimal ground truth.<p><strong>Methods:<\/strong> Landmark points for each CT\/CBCT image pair for 58 pelvic cases were identified. From the identified landmark pairs, combination subsets of k-number of landmark pairs were generated without repeat, to form a k-set for k=4, 8, &amp;12. An affine registration between the image pairs was calculated for each k-combination set (2,000-8,000,000). The mean and the standard deviation of the registration were used as the final registration for each image pair. Joint entropy was employed to measure and compare the quality of CORRO to commercially available software.<\/p><p><strong>Results: <\/strong>An average of 154 (range: 91-212) landmark pairs were selected for each CT\/CBCT image pair. The mean standard deviation of the registration output decreased as the k-size increased for all cases.\u00a0 In general the joint entropy evaluated was found to be lower than results from commercially available software. Of all 58 cases 58.3% of the k=4, 15% of k=8 and 18.3% of k=12 resulted in the better registration using CORRO as compared to 8.3% from a commercial registration software. The minimum joint entropy was determined for one case and found to exist at the estimated registration mean in agreement with the CORRO approach.<\/p><p><strong>Conclusion:<\/strong> The results demonstrate that CORRO works even in the extreme case of the pelvic anatomy where the CBCT suffers from reduced quality due to increased noise levels. The estimated ground truth using CORRO was found to be better than commercially available software for all k-sets tested. Additionally, the k-set of 4 resulted in overall best outcomes when compared to k=8 and 12, which is anticipated because k=8 and 12 are more likely to have combinations that affected the accuracy of the registration.<\/p>\n\nFigure 1. Content of planning CT shifted to the machine isocenter. Top left to right - axial, coronal and sagittal planning CT image with machine isocenter in red and image isocenter in blue. Middle left to right - axial, coronal and sagittal planning CT at machine isocenter. Bottom left to right - axial, coronal and sagittal CBCT at machine isocenter.\nAcknowledgements\nWe would like to acknowledge the individuals and institutions that have provided data for this collection:\n<ul><li><p>Beaumont Health : Afua Yorke, Gary McDonald, David Solis, Thomas Guerrero.\u00a0 We thank Beaumont Hospital Royal Oak MI, for their support. And thanks to Charles K. Yorke, Ph.D., and Brad J. Roth Ph.D.<\/p><\/li><\/ul>\n<br\/>","collection_acknowledgements":"","collection_funding":"","hide_from_browse_table":[],"_links":{"self":[{"href":"https:\/\/cm.vastapps.dev\/api\/v1\/collections\/5646"}],"collection":[{"href":"https:\/\/cm.vastapps.dev\/api\/v1\/collections"}],"about":[{"href":"https:\/\/cm.vastapps.dev\/api\/wp\/v2\/types\/tcia_collection"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/cm.vastapps.dev\/api\/wp\/v2\/media\/8057"}],"wp:attachment":[{"href":"https:\/\/cm.vastapps.dev\/api\/wp\/v2\/media?parent=5646"}],"wp:term":[{"taxonomy":"tcia_citation_tax","embeddable":true,"href":"https:\/\/cm.vastapps.dev\/api\/v1\/citation-tax?post=5646"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}