{"id":5641,"date":"2023-09-04T03:14:43","date_gmt":"2023-09-04T03:14:43","guid":{"rendered":"https:\/\/cm.vastapps.dev\/tcia-collection\/nsclc-radiomics-interobserver1\/"},"modified":"2023-09-13T12:01:07","modified_gmt":"2023-09-13T12:01:07","slug":"nsclc-radiomics-interobserver1","status":"publish","type":"tcia_collection","link":"https:\/\/cm.vastapps.dev\/tcia-collection\/nsclc-radiomics-interobserver1\/","title":{"rendered":"NSCLC-RADIOMICS-INTEROBSERVER1"},"featured_media":7878,"template":"","citation-tax":[],"cancer_types":["Non-small Cell Lung Cancer"],"citations":[4554,4555,4556,2925],"collection_doi":"10.7937\/tcia.2019.cwvlpd26","collection_download_info":"Click the Versions tab for more info about data releases.","collection_downloads":[5157,5158],"full_export":"<h2 id=\"NSCLCRadiomicsInterobserver1-Summary\">Summary<\/h2><p><br\/><\/p><p style=\"text-align: left;\">This collection contains clinical data and computed tomography (CT) from 22 non-small cell lung cancer (NSCLC) radiotherapy patients. For 21 of these patients with pre-treatment CT scans, repeated blinded manual delineations by five different radiation oncologists of the 3D volume of the gross tumor volume on CT and clinical outcome data are available. The above was repeated with the same set of five radiation oncologists, using an in-house autosegmentation tool for initial delineation followed by manual adjustment of the primary gross tumor volume outline. For one patient, clinical data and CT was available but the tumor delineations were not extracted. This patient was included in this collection for the sake of completeness.<\/p><p style=\"text-align: left;\">This dataset refers to the &quot;Multiple delineation&quot; dataset of the study published in Nature Communications (<a href=\"https:\/\/doi.org\/10.1038\/ncomms5006\" class=\"external-link\" rel=\"nofollow\">https:\/\/doi.org\/10.1038\/ncomms5006<\/a>). In short, the publication used a radiomics approach to computed tomography data of 1,019 patients with lung or head-and-neck cancer. Radiomics refers to the comprehensive quantification of tumor phenotypes by applying a large number of quantitative image features. In the published analysis, 440 features quantifying tumor image intensity, shape, and texture were extracted. We found that a large number of radiomic features have prognostic power in independent data sets, many of which were not identified as significant before. Radiogenomics analysis revealed that a prognostic radiomic signature, capturing intra-tumor heterogeneity, was associated with underlying gene-expression patterns. These data suggest that radiomics identifies a general prognostic phenotype existing in both lung and head-and-neck cancer. This may have a clinical impact as imaging is routinely used in clinical practice, providing an unprecedented opportunity to improve decision-support in cancer treatment at low cost.<\/p><p><span>The delineations are provided in two formats; DICOM RTSTRUCT contains slice by slice contour points of the external outline of the primary tumour. DICOM SEGMENTATION contains binary masks of the same primary tumour. The nomenclature of the structures are as follows:<\/span><\/p><ul><li><span>\u201cGTV-1\u201d denotes the index tumour, specifically the Gross Tumour Volume (GTV)<\/span><\/li><li><span>\u201cvis\u201d denotes manual delineation by radiation oncologists<\/span><\/li><li><span>\u201cauto\u201d denotes assistance by an\u00a0autosegmentation\u00a0tool followed with manual editing by radiation oncologists<\/span><\/li><li><span>\u201c1\u201d, \u201c2\u201d, \u2026., \u201c5\u201d denotes the individual radiation oncologists working independently of each other<\/span><\/li><\/ul><p><span>Side note : Radiation oncologists denoted \u201c1\u201d and \u201c3\u201d were trainee radiation oncologists at the time of this experiment. Radiation oncologists \u201c2\u201d, \u201c4\u201d and \u201c5\u201d were extensively experienced at the time of this experiment.<\/span><\/p><p style=\"text-align: left;\"><span style=\"color: rgb(33,33,33);\">This dataset is intended to be open access to support repeatability and reproducibility of research in the radiomics domain. This dataset has been referenced in Medical Physics Dataset Article addressing FAIR radiomics practices to support transparency, harmonization and collaboration on radiomics (<\/span><a href=\"https:\/\/doi.org\/10.1002\/mp.14322\" class=\"external-link\" rel=\"nofollow\">https:\/\/doi.org\/10.1002\/mp.14322<\/a><span style=\"color: rgb(33,33,33);\">).<\/span><\/p><p style=\"text-align: left;\"><br\/><\/p><p style=\"text-align: left;\"><span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\"><img class=\"confluence-embedded-image\" draggable=\"false\" height=\"250\" src=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/embedded-page\/Public\/NSCLC-Radiomics-Interobserver1\/NSCLC%20RADIOMICS%20GRAPHIC.jpg?api=v2\"><\/span><\/p><p><br\/><\/p><p><span style=\"color: rgb(23,43,77);\">Other data sets in the Cancer Imaging Archive that were used in the same<span>\u00a0<\/span><\/span><a class=\"external-link\" rel=\"nofollow\" href=\"http:\/\/www.nature.com\/ncomms\/2014\/140603\/ncomms5006\/full\/ncomms5006.html\" style=\"text-decoration: underline;\">study published in Nature Communications<\/a><span style=\"color: rgb(23,43,77);\">:<span>\u00a0<\/span><\/span><a href=\"https:\/\/wiki.cancerimagingarchive.net\/pages\/viewpage.action?pageId=52762760\">HEAD-NECK-RADIOMICS-HN1<\/a> ,\u00a0<a href=\"\">NSCLC-Radiomics<\/a><span style=\"color: rgb(23,43,77);\">,<span>\u00a0<a href=\"https:\/\/wiki.cancerimagingarchive.net\/pages\/viewpage.action?pageId=16056856\">NSCLC-Radiomics-Genomics<\/a>, <\/span><\/span><a href=\"https:\/\/wiki.cancerimagingarchive.net\/pages\/viewpage.action?pageId=46334165\">RIDER-LungCT-Seg<\/a><span style=\"color: rgb(23,43,77);\">.<\/span><\/p><p>For scientific or other inquiries about this dataset, please\u00a0<a class=\"external-link\" href=\"http:\/\/www.cancerimagingarchive.net\/support\/\" style=\"text-decoration: underline;text-align: left;\" rel=\"nofollow\">contact TCIA's Helpdesk<\/a><span style=\"color: rgb(33,37,41);\">.<\/span><\/p><p><strong>Acknowledgements<\/strong><\/p><p>We would like to acknowledge the individuals and institutions that have provided data for this collection:<\/p><ul><li>Leonard Wee, MAASTRO (Dept of Radiotherapy), Maastricht University Medical Centre+, Maastricht, Limburg, The Netherlands.<\/li><li>Dirk de<span>\u00a0<\/span><span>Ruysscher<\/span>, MAASTRO (Dept of Radiotherapy), Maastricht University Medical Centre+, Maastricht, Limburg, The Netherlands.<\/li><li>Andre Dekker, MAASTRO (Dept of Radiotherapy), Maastricht University Medical Centre+, Maastricht, Limburg, The Netherlands.<\/li><li>Hugo<span>\u00a0<\/span><span>Aerts<\/span>, Computational Imaging and Bioinformatic Laboratory, Dana-Farber Cancer Institute &amp; Harvard Medical School, Boston, Massachusetts, USA.<\/li><li><span style=\"color: rgb(33,33,33);\">Petros Kalendralis, MAASTRO (Dept of Radiotherapy), Maastricht University Medical Centre+, Maastricht, Limburg, The Netherlands.<\/span><\/li><li>Harmonization of the components of this dataset, including into\u00a0standard DICOM representation, was supported in part by the NCI\u00a0Imaging Data Commons consortium. NCI Imaging Data Commons consortium\u00a0is supported by the contract number 19X037Q from Leidos Biomedical\u00a0Research under Task Order HHSN26100071 from NCI.<\/li><\/ul><div class=\"tab-style-builtin\"><div class=\"localtabs-macro\"><div class=\"aui-tabs horizontal-tabs\" role=\"application\" data-aui-responsive=\"true\"><ul class=\"tabs-menu\"><li class=\"menu-item bv-localtab  active-tab \"><a href=\"#52756590baa906a7f8b140138bbec46cf3aee0cf\"><strong>Data Access<\/strong><\/a> <\/li><li class=\"menu-item bv-localtab \"><a href=\"#52756590af883c51e84843f9be85811e9c806cd3\"><strong>Detailed Description<\/strong><\/a> <\/li><li class=\"menu-item bv-localtab \"><a href=\"#52756590d4737dba28564721a473bb47ed709349\"><strong>Citations &amp; Data Usage Policy<\/strong><\/a> <\/li><li class=\"menu-item bv-localtab \"><a href=\"#527565903e7df7d7cb204335be6f7fb4e398b48a\"><strong>Versions<\/strong><\/a> <\/li><\/ul><div class=\"tabs-pane  active-pane \" id=\"52756590baa906a7f8b140138bbec46cf3aee0cf\" active=\"true\" name=\"Data Access\" ><h3 id=\"NSCLCRadiomicsInterobserver1-DataAccess\">Data Access<\/h3><div class=\"table-wrap\"><table class=\"relative-table wrapped confluenceTable\" style=\"width: 56.2394%;\"><colgroup><col style=\"width: 31.435%;\"\/><col style=\"width: 35.3019%;\"\/><col style=\"width: 33.2253%;\"\/><\/colgroup><tbody><tr><th class=\"confluenceTh\"><span>Data Type<\/span><\/th><th class=\"confluenceTh\"><span>Download all or Query\/Filter<\/span><\/th><th class=\"confluenceTh\"><span>License<\/span><\/th><\/tr><tr><td class=\"confluenceTd\"><span>Images and Segmentations (DICOM, 3.2 GB)<\/span><\/td><td class=\"confluenceTd\"><div class=\"content-wrapper\"><p>\n\n<span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\">\n   <a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/52756590\/NSCLC-RADIOMICS-INTEROBSERVER1-Aug%2031%202020-NBIA-manifest.tcia?version=1&amp;modificationDate=1598890227618&amp;api=v2\" rel=\"nofollow\"><button class=\"tcia-btn tcia-download-color\"><i class=\"fa fa-cloud-download\" \/> Download<\/button><\/a>\u00a0\n<\/span>\n\n<span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\">\n   <a href=\"https:\/\/nbia.cancerimagingarchive.net\/nbia-search\/?MinNumberOfStudiesCriteria=1&amp;CollectionCriteria=NSCLC-Radiomics-Interobserver1\" class=\"external-link\" rel=\"nofollow\"><button class=\"tcia-btn tcia-search-color\"><i class=\"fa fa-search\" \/> Search<\/button><\/a>\u00a0\n<\/span><a href=\"https:\/\/nbia.cancerimagingarchive.net\/nbia-search\/?MinNumberOfStudiesCriteria=1&amp;CollectionCriteria=NSCLC-Radiomics-Interobserver1\" class=\"external-link\" rel=\"nofollow\"><br class=\"auto-cursor-target\"\/><\/a><\/p><p>(Download requires\u00a0the\u00a0<a href=\"https:\/\/wiki.cancerimagingarchive.net\/pages\/viewpage.action?pageId=44499834\">NBIA Data Retriever<\/a>)<\/p><\/div><\/td><td class=\"confluenceTd\"><div class=\"content-wrapper\"><p><br\/><\/p><p>\n<a href=\"https:\/\/creativecommons.org\/licenses\/by-nc\/3.0\/\" class=\"external-link\" rel=\"nofollow\">CC BY-NC 3.0<\/a><\/p><\/div><\/td><\/tr><tr><td class=\"confluenceTd\"><span style=\"color: rgb(23,43,77);\">Clinical Data (CSV)<\/span><\/td><td class=\"confluenceTd\"><div class=\"content-wrapper\"><p>\n\n<span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\">\n   <a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/52756590\/Interobserver1.clinical_updated_released_2019-June-17.csv?version=1&amp;modificationDate=1560796626334&amp;api=v2\" rel=\"nofollow\"><button class=\"tcia-btn tcia-download-color\"><i class=\"fa fa-cloud-download\" \/> Download<\/button><\/a>\u00a0\n<\/span><\/p><\/div><\/td><td class=\"confluenceTd\"><div class=\"content-wrapper\"><p><span class=\"confluence-link\">\n<a href=\"https:\/\/creativecommons.org\/licenses\/by-nc\/3.0\/\" class=\"external-link\" rel=\"nofollow\">CC BY-NC 3.0<\/a><\/span><\/p><\/div><\/td><\/tr><\/tbody><\/table><\/div><p class=\"auto-cursor-target\"><span style=\"letter-spacing: 0.0px;\">Click the Versions tab for more info about data releases.<\/span><\/p><\/div><div class=\"tabs-pane \" id=\"52756590af883c51e84843f9be85811e9c806cd3\" name=\"Detailed Description\" ><h3 id=\"NSCLCRadiomicsInterobserver1-DetailedDescription\">Detailed Description<\/h3><div class=\"table-wrap\"><table class=\"wrapped confluenceTable\"><colgroup><col\/><col\/><\/colgroup><tbody><tr><th class=\"confluenceTh\"><p>Image Statistics<\/p><\/th><th class=\"confluenceTh\"><br\/><\/th><\/tr><tr><td class=\"confluenceTd\"><p>Modalities<\/p><\/td><td class=\"confluenceTd\"><p>CT, RTSTRUCT, SEG<\/p><\/td><\/tr><tr><td class=\"confluenceTd\"><p>Number of Participants<\/p><\/td><td class=\"confluenceTd\"><p>22<\/p><\/td><\/tr><tr><td class=\"confluenceTd\"><p>Number of Studies<\/p><\/td><td class=\"confluenceTd\"><p>22<\/p><\/td><\/tr><tr><td class=\"confluenceTd\"><p>Number of Series<\/p><\/td><td class=\"confluenceTd\"><p>64<\/p><\/td><\/tr><tr><td class=\"confluenceTd\"><p>Number of Images<\/p><\/td><td class=\"confluenceTd\"><p>3886<\/p><\/td><\/tr><tr><td colspan=\"1\" class=\"confluenceTd\">Images Size (GB)<\/td><td colspan=\"1\" class=\"confluenceTd\">3.2<\/td><\/tr><\/tbody><\/table><\/div><\/div><div class=\"tabs-pane \" id=\"52756590d4737dba28564721a473bb47ed709349\" name=\"Citations BITVOODOO_ANDamp; Data Usage Policy\" ><h3 id=\"NSCLCRadiomicsInterobserver1-Citations&amp;DataUsagePolicy\">Citations &amp; Data Usage Policy<\/h3><p>\n<p>\nUsers must abide by the <a href=\"https:\/\/wiki.cancerimagingarchive.net\/x\/c4hF\" class=\"external-link\" rel=\"nofollow\">TCIA Data Usage Policy and Restrictions<\/a>. Attribution should include references to the following citations:\n<\/p><\/p><div class=\"confluence-information-macro confluence-information-macro-information\"><p class=\"title\">Data Citation<\/p><span class=\"aui-icon aui-icon-small aui-iconfont-info confluence-information-macro-icon\"><\/span><div class=\"confluence-information-macro-body\"><p><span style=\"color: rgb(51,51,51);\">Wee, L., Aerts, H. J.L., Kalendralis, P., &amp; Dekker, A. (2019). <strong>Data from NSCLC-Radiomics-Interobserver1 [Data set]<\/strong>. The Cancer Imaging Archive. <a href=\"https:\/\/doi.org\/10.7937\/tcia.2019.cwvlpd26\" class=\"external-link\" rel=\"nofollow\">https:\/\/doi.org\/10.7937\/tcia.2019.cwvlpd26<\/a>.<\/span><\/p><\/div><\/div><div class=\"confluence-information-macro confluence-information-macro-information\"><p class=\"title\">Publication Citation<\/p><span class=\"aui-icon aui-icon-small aui-iconfont-info confluence-information-macro-icon\"><\/span><div class=\"confluence-information-macro-body\"><p>Aerts HJWL, Velazquez ER, Leijenaar RTH, Parmar C, Grossmann P, Carvalho S, Bussink J, Monshouwer R, Haibe-Kains B, Rietveld D, Hoebers F, Rietbergen MM, Leemans CR, Dekker A, Quackenbush J, Gillies RJ, Lambin P. <strong>Decoding Tumour Phenotype by Noninvasive Imaging Using a Quantitative Radiomics Approach<\/strong>,\u00a0Nature Communications, Volume 5, Article Number 4006, June 03, 2014. DOI: <a style=\"text-decoration: underline;\" rel=\"nofollow\" href=\"http:\/\/doi.org\/10.1038\/ncomms5006\" class=\"external-link\">http:\/\/doi.org\/10.1038\/ncomms5006<\/a>.\u00a0<\/p><\/div><\/div><div class=\"confluence-information-macro confluence-information-macro-information\"><p class=\"title\">Publication Citation<\/p><span class=\"aui-icon aui-icon-small aui-iconfont-info confluence-information-macro-icon\"><\/span><div class=\"confluence-information-macro-body\"><p><span style=\"color: rgb(33,33,33);\">Kalendralis, P., Shi, Z., Traverso, A., Choudhury, A., Sloep, M., Zhovannik, I., Starmans, M.P., Grittner, D., Feltens, P., Monshouwer, R., Klein, S., Fijten, R., Aerts, H., Dekker, A., van Soest, J. and Wee, L. (2020).\u00a0<strong>FAIR\u2010compliant clinical, radiomics and DICOM metadata of RIDER, Interobserver, Lung1 and Head\u2010Neck1 TCIA collections<\/strong>. Medical Physics. DOI:<span>\u00a0<\/span><\/span><a href=\"https:\/\/doi.org\/10.1002\/mp.14322\" class=\"external-link\" rel=\"nofollow\">https:\/\/doi.org\/10.1002\/mp.14322<\/a><span style=\"color: rgb(33,33,33);\">.<\/span><\/p><\/div><\/div><div class=\"confluence-information-macro confluence-information-macro-information\"><p class=\"title\">TCIA Citation<\/p><span class=\"aui-icon aui-icon-small aui-iconfont-info confluence-information-macro-icon\"><\/span><div class=\"confluence-information-macro-body\"><p>Clark K, Vendt B, Smith K, Freymann J, Kirby J, Koppel P, Moore S, Phillips S, Maffitt D, Pringle M, Tarbox L, Prior F.\u00a0<strong>The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository<\/strong>, Journal of Digital Imaging, Volume 26, Number 6, December, 2013, pp 1045-1057. DOI: <a href=\"https:\/\/doi.org\/10.1007\/s10278-013-9622-7\" class=\"external-link\" rel=\"nofollow\">10.1007\/s10278-013-9622-7<\/a><\/p><\/div><\/div><p><span>Questions may be directed to\u00a0<a href=\"mailto:help@cancerimagingarchive.net\" class=\"external-link\" rel=\"nofollow\">help@cancerimagingarchive.net<\/a>.\u00a0<\/span><\/p><h3 id=\"NSCLCRadiomicsInterobserver1-OtherPublicationsUsingThisData\">Other Publications Using This Data<\/h3><p><span>TCIA maintains<\/span><a href=\"https:\/\/www.cancerimagingarchive.net\/publications\/\" class=\"external-link\" rel=\"nofollow\"> a list of publications<\/a><span> which leverage our data. <\/span> If you have a manuscript you'd like to add please <a href=\"http:\/\/www.cancerimagingarchive.net\/support\/\" class=\"external-link\" rel=\"nofollow\">contact TCIA's Helpdesk<\/a>.<\/p><\/div><div class=\"tabs-pane \" id=\"527565903e7df7d7cb204335be6f7fb4e398b48a\" name=\"Versions\" ><bvtabinfo tabid=\"52756590f5a94bf9b72d4d6c88fc963091f5eb8f\" tabname=\"Versions\" tabicon=\"\" externaltabimgurl=\"\"><h3 id=\"NSCLCRadiomicsInterobserver1-Version3(Current):Updated2020\/08\/31\">Version 3 (Current): Updated 2020\/08\/31<\/h3><div class=\"table-wrap\"><table class=\"wrapped confluenceTable\"><colgroup><col\/><col\/><\/colgroup><tbody><tr><th class=\"confluenceTh\"><span>Data Type<\/span><\/th><th class=\"confluenceTh\"><span>Download all or Query\/Filter<\/span><\/th><\/tr><tr><td class=\"confluenceTd\"><span>Images (DICOM, 3.2 GB)<\/span><\/td><td class=\"confluenceTd\"><div class=\"content-wrapper\"><p>\n\n<span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\">\n   <a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/52756590\/NSCLC-RADIOMICS-INTEROBSERVER1-Aug%2031%202020-NBIA-manifest.tcia?version=1&amp;modificationDate=1598890227618&amp;api=v2\" rel=\"nofollow\"><button class=\"tcia-btn tcia-download-color\"><i class=\"fa fa-cloud-download\" \/> Download<\/button><\/a>\u00a0\n<\/span>\n\n<span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\">\n   <a href=\"https:\/\/nbia.cancerimagingarchive.net\/nbia-search\/?MinNumberOfStudiesCriteria=1&amp;CollectionCriteria=NSCLC-RADIOMICS-INTEROBSERVER1\" class=\"external-link\" rel=\"nofollow\"><button class=\"tcia-btn tcia-search-color\"><i class=\"fa fa-search\" \/> Search<\/button><\/a>\u00a0\n<\/span><a href=\"https:\/\/nbia.cancerimagingarchive.net\/nbia-search\/?MinNumberOfStudiesCriteria=1&amp;CollectionCriteria=NSCLC-RADIOMICS-INTEROBSERVER1\" class=\"external-link\" rel=\"nofollow\"><br class=\"auto-cursor-target\"\/><\/a><\/p><p>(Download requires\u00a0the\u00a0<a href=\"https:\/\/wiki.cancerimagingarchive.net\/pages\/viewpage.action?pageId=44499834\">NBIA Data Retriever<\/a>)<\/p><\/div><\/td><\/tr><tr><td colspan=\"1\" class=\"confluenceTd\"><span style=\"color: rgb(23,43,77);\">Clinical Data (CSV)<\/span><\/td><td colspan=\"1\" class=\"confluenceTd\"><div class=\"content-wrapper\"><p>\n\n<span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\">\n   <a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/52756590\/Interobserver1.clinical_updated_released_2019-June-17.csv?version=1&amp;modificationDate=1560796626334&amp;api=v2\" rel=\"nofollow\"><button class=\"tcia-btn tcia-download-color\"><i class=\"fa fa-cloud-download\" \/> Download<\/button><\/a>\u00a0\n<\/span><\/p><\/div><\/td><\/tr><\/tbody><\/table><\/div><p><span style=\"color: rgb(33,33,33);\">Resolved the inadvertent mismatch of the labels between the DICOM Segmentations and the RTSTRUCT annotations. Version 2 was replaced.<\/span><\/p><h3 id=\"NSCLCRadiomicsInterobserver1-Version2:Updated2019\/10\/18\">Version 2: Updated 2019\/10\/18<\/h3><div class=\"table-wrap\"><table class=\"wrapped confluenceTable\"><colgroup><col\/><col\/><\/colgroup><tbody><tr><th class=\"confluenceTh\"><span>Data Type<\/span><\/th><th class=\"confluenceTh\"><span>Download all or Query\/Filter<\/span><\/th><\/tr><tr><td class=\"confluenceTd\"><span>Images (DICOM, 3.2 GB)<\/span><\/td><td class=\"confluenceTd\"><div class=\"content-wrapper\"><p>\n\n<span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\">\n   <a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/52756590\/NSCLC-RADIOMICS-INTEROBSERVER1-Oct2019-NBIA-manifest.tcia?version=1&amp;modificationDate=1571348370510&amp;api=v2\" rel=\"nofollow\"><button class=\"tcia-btn tcia-download-color\"><i class=\"fa fa-cloud-download\" \/> Download<\/button><\/a>\u00a0\n<\/span>\n\n<span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\">\n   <a href=\"https:\/\/nbia.cancerimagingarchive.net\/nbia-search\/?MinNumberOfStudiesCriteria=1&amp;CollectionCriteria=NSCLC-RADIOMICS-INTEROBSERVER1\" class=\"external-link\" rel=\"nofollow\"><button class=\"tcia-btn tcia-search-color\"><i class=\"fa fa-search\" \/> Search<\/button><\/a>\u00a0\n<\/span><a href=\"https:\/\/nbia.cancerimagingarchive.net\/nbia-search\/?MinNumberOfStudiesCriteria=1&amp;CollectionCriteria=NSCLC-RADIOMICS-INTEROBSERVER1\" class=\"external-link\" rel=\"nofollow\"><br class=\"auto-cursor-target\"\/><\/a><\/p><p>(Download requires\u00a0the\u00a0<a href=\"https:\/\/wiki.cancerimagingarchive.net\/pages\/viewpage.action?pageId=44499834\">NBIA Data Retriever<\/a>)<\/p><\/div><\/td><\/tr><tr><td colspan=\"1\" class=\"confluenceTd\"><span style=\"color: rgb(23,43,77);\">Clinical Data (CSV)<\/span><\/td><td colspan=\"1\" class=\"confluenceTd\"><div class=\"content-wrapper\"><p>\n\n<span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\">\n   <a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/52756590\/Interobserver1.clinical_updated_released_2019-June-17.csv?version=1&amp;modificationDate=1560796626334&amp;api=v2\" rel=\"nofollow\"><button class=\"tcia-btn tcia-download-color\"><i class=\"fa fa-cloud-download\" \/> Download<\/button><\/a>\u00a0\n<\/span><\/p><\/div><\/td><\/tr><\/tbody><\/table><\/div><p>Added DICOM Segmentations for the primary tumor only, the ROI (GTV-1) for the RTSTRUCTs and DICOM Segs are the same.<\/p><h3 id=\"NSCLCRadiomicsInterobserver1-Version1:Updated2019\/06\/02\">Version 1: Updated 2019\/06\/02<\/h3><div class=\"table-wrap\"><table class=\"wrapped confluenceTable\"><colgroup><col\/><col\/><\/colgroup><tbody><tr><th class=\"confluenceTh\"><span>Data Type<\/span><\/th><th class=\"confluenceTh\"><span>Download all or Query\/Filter<\/span><\/th><\/tr><tr><td class=\"confluenceTd\"><span>Images (DICOM, 2.0 GB)<\/span><\/td><td class=\"confluenceTd\"><div class=\"content-wrapper\"><p>\n\n<span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\">\n   <a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/52756590\/NSCLC-RADIOMICS-INTEROBSERVER1-NBIA-manifest.tcia?version=1&amp;modificationDate=1560947536162&amp;api=v2\" rel=\"nofollow\"><button class=\"tcia-btn tcia-download-color\"><i class=\"fa fa-cloud-download\" \/> Download<\/button><\/a>\u00a0\n<\/span>\n\n<span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\">\n   <a href=\"https:\/\/nbia.cancerimagingarchive.net\/nbia-search\/?MinNumberOfStudiesCriteria=1&amp;CollectionCriteria=NSCLC-RADIOMICS-INTEROBSERVER1\" class=\"external-link\" rel=\"nofollow\"><button class=\"tcia-btn tcia-search-color\"><i class=\"fa fa-search\" \/> Search<\/button><\/a>\u00a0\n<\/span><a href=\"https:\/\/nbia.cancerimagingarchive.net\/nbia-search\/?MinNumberOfStudiesCriteria=1&amp;CollectionCriteria=NSCLC-RADIOMICS-INTEROBSERVER1\" class=\"external-link\" rel=\"nofollow\"><br class=\"auto-cursor-target\"\/><\/a><\/p><p>(Download requires\u00a0the\u00a0<a href=\"https:\/\/wiki.cancerimagingarchive.net\/pages\/viewpage.action?pageId=44499834\">NBIA Data Retriever<\/a>)<\/p><\/div><\/td><\/tr><tr><td colspan=\"1\" class=\"confluenceTd\"><span style=\"color: rgb(23,43,77);\">Clinical Data (CSV)<\/span><\/td><td colspan=\"1\" class=\"confluenceTd\"><div class=\"content-wrapper\"><p>\n\n<span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\">\n   <a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/52756590\/Interobserver1.clinical_updated_released_2019-June-17.csv?version=1&amp;modificationDate=1560796626334&amp;api=v2\" rel=\"nofollow\"><button class=\"tcia-btn tcia-download-color\"><i class=\"fa fa-cloud-download\" \/> Download<\/button><\/a>\u00a0\n<\/span><\/p><\/div><\/td><\/tr><\/tbody><\/table><\/div><\/div><\/div><\/div><\/div>","versions":false,"additional_resources":"","cancer_locations":["Lung"],"collection_page_accessibility":"Public","publications_related":"","version_change_log":"","version_change_log_archived":"","analysis_results":"","collection_status":"Complete","publications_using":"TCIA maintains<a href=\"https:\/\/www.cancerimagingarchive.net\/publications\/\"> a list of publications<\/a> which leverage our data.  If you have a manuscript you'd like to add please <a href=\"http:\/\/www.cancerimagingarchive.net\/support\/\">contact TCIA's Helpdesk<\/a>.","species":["Human"],"collection_title":"NSCLC-Radiomics-Interobserver1","detailed_description":"","related_analysis_results":false,"subjects":"22","collection_short_title":"NSCLC-Radiomics-Interobserver1","data_types":["CT","RTSTRUCT","SEG"],"date_updated":"2023-09-13","collection_browse_title":"","supporting_data":["Clinical"],"collection_featured_image":{"ID":"7878","post_author":"6","post_date":"2023-09-13 03:46:45","post_date_gmt":"2023-09-13 03:46:45","post_content":"","post_title":"NSCLC-RADIOMICS-GRAPHIC","post_excerpt":"","post_status":"inherit","comment_status":"open","ping_status":"closed","post_password":"","post_name":"nsclc-radiomics-graphic","to_ping":"","pinged":"","post_modified":"2023-09-13 11:59:24","post_modified_gmt":"2023-09-13 11:59:24","post_content_filtered":"","post_parent":"5605","guid":"https:\/\/cm.vastapps.dev\/wp-content\/uploads\/NSCLC-RADIOMICS-GRAPHIC.jpg","menu_order":"0","post_type":"attachment","post_mime_type":"image\/jpeg","comment_count":"0","pod_item_id":"7878"},"collection_summary":"<br\/>\nThis collection contains clinical data and computed tomography (CT) from 22 non-small cell lung cancer (NSCLC) radiotherapy patients. For 21 of these patients with pre-treatment CT scans, repeated blinded manual delineations by five different radiation oncologists of the 3D volume of the gross tumor volume on CT and clinical outcome data are available. The above was repeated with the same set of five radiation oncologists, using an in-house autosegmentation tool for initial delineation followed by manual adjustment of the primary gross tumor volume outline. For one patient, clinical data and CT was available but the tumor delineations were not extracted. This patient was included in this collection for the sake of completeness.<p>This dataset refers to the \"Multiple delineation\" dataset of the study published in Nature Communications (<a href=\"https:\/\/doi.org\/10.1038\/ncomms5006\">https:\/\/doi.org\/10.1038\/ncomms5006<\/a>). In short, the publication used a radiomics approach to computed tomography data of 1,019 patients with lung or head-and-neck cancer. Radiomics refers to the comprehensive quantification of tumor phenotypes by applying a large number of quantitative image features. In the published analysis, 440 features quantifying tumor image intensity, shape, and texture were extracted. We found that a large number of radiomic features have prognostic power in independent data sets, many of which were not identified as significant before. Radiogenomics analysis revealed that a prognostic radiomic signature, capturing intra-tumor heterogeneity, was associated with underlying gene-expression patterns. These data suggest that radiomics identifies a general prognostic phenotype existing in both lung and head-and-neck cancer. This may have a clinical impact as imaging is routinely used in clinical practice, providing an unprecedented opportunity to improve decision-support in cancer treatment at low cost.<\/p><p>The delineations are provided in two formats; DICOM RTSTRUCT contains slice by slice contour points of the external outline of the primary tumour. DICOM SEGMENTATION contains binary masks of the same primary tumour. The nomenclature of the structures are as follows:<\/p><ul><li>\u201cGTV-1\u201d denotes the index tumour, specifically the Gross Tumour Volume (GTV)<\/li><li>\u201cvis\u201d denotes manual delineation by radiation oncologists<\/li><li>\u201cauto\u201d denotes assistance by an\u00a0autosegmentation\u00a0tool followed with manual editing by radiation oncologists<\/li><li>\u201c1\u201d, \u201c2\u201d, \u2026., \u201c5\u201d denotes the individual radiation oncologists working independently of each other<\/li><\/ul><p>Side note : Radiation oncologists denoted \u201c1\u201d and \u201c3\u201d were trainee radiation oncologists at the time of this experiment. Radiation oncologists \u201c2\u201d, \u201c4\u201d and \u201c5\u201d were extensively experienced at the time of this experiment.<\/p><p>This dataset is intended to be open access to support repeatability and reproducibility of research in the radiomics domain. This dataset has been referenced in Medical Physics Dataset Article addressing FAIR radiomics practices to support transparency, harmonization and collaboration on radiomics (<a href=\"https:\/\/doi.org\/10.1002\/mp.14322\">https:\/\/doi.org\/10.1002\/mp.14322<\/a>).<\/p><p><\/p>\n<br\/>\nOther data sets in the Cancer Imaging Archive that were used in the same\u00a0<a href=\"http:\/\/www.nature.com\/ncomms\/2014\/140603\/ncomms5006\/full\/ncomms5006.html\">study published in Nature Communications<\/a>:\u00a0<a href=\"\/display\/Public\/HEAD-NECK-RADIOMICS-HN1\">HEAD-NECK-RADIOMICS-HN1<\/a> ,\u00a0<a href=\"\">NSCLC-Radiomics<\/a>,\u00a0<a href=\"\/display\/Public\/NSCLC-Radiomics-Genomics\">NSCLC-Radiomics-Genomics<\/a>, <a href=\"\/pages\/viewpage.action?pageId=46334165\">RIDER-LungCT-Seg<\/a>.\nFor scientific or other inquiries about this dataset, please\u00a0<a href=\"http:\/\/www.cancerimagingarchive.net\/support\/\">contact TCIA's Helpdesk<\/a>.\n<strong>Acknowledgements<\/strong>\nWe would like to acknowledge the individuals and institutions that have provided data for this collection:\n<ul><li>Leonard Wee, MAASTRO (Dept of Radiotherapy), Maastricht University Medical Centre+, Maastricht, Limburg, The Netherlands.<\/li><li>Dirk de\u00a0Ruysscher, MAASTRO (Dept of Radiotherapy), Maastricht University Medical Centre+, Maastricht, Limburg, The Netherlands.<\/li><li>Andre Dekker, MAASTRO (Dept of Radiotherapy), Maastricht University Medical Centre+, Maastricht, Limburg, The Netherlands.<\/li><li>Hugo\u00a0Aerts, Computational Imaging and Bioinformatic Laboratory, Dana-Farber Cancer Institute &amp; Harvard Medical School, Boston, Massachusetts, USA.<\/li><li>Petros Kalendralis, MAASTRO (Dept of Radiotherapy), Maastricht University Medical Centre+, Maastricht, Limburg, The Netherlands.<\/li><li>Harmonization of the components of this dataset, including into\u00a0standard DICOM representation, was supported in part by the NCI\u00a0Imaging Data Commons consortium. NCI Imaging Data Commons consortium\u00a0is supported by the contract number 19X037Q from Leidos Biomedical\u00a0Research under Task Order HHSN26100071 from NCI.<\/li><\/ul>","collection_acknowledgements":"","collection_funding":"","hide_from_browse_table":[],"_links":{"self":[{"href":"https:\/\/cm.vastapps.dev\/api\/v1\/collections\/5641"}],"collection":[{"href":"https:\/\/cm.vastapps.dev\/api\/v1\/collections"}],"about":[{"href":"https:\/\/cm.vastapps.dev\/api\/wp\/v2\/types\/tcia_collection"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/cm.vastapps.dev\/api\/wp\/v2\/media\/7878"}],"wp:attachment":[{"href":"https:\/\/cm.vastapps.dev\/api\/wp\/v2\/media?parent=5641"}],"wp:term":[{"taxonomy":"tcia_citation_tax","embeddable":true,"href":"https:\/\/cm.vastapps.dev\/api\/v1\/citation-tax?post=5641"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}