{"id":5599,"date":"2023-09-04T03:11:29","date_gmt":"2023-09-04T03:11:29","guid":{"rendered":"https:\/\/cm.vastapps.dev\/tcia-collection\/qin-brain-dsc-mri\/"},"modified":"2023-09-13T11:59:10","modified_gmt":"2023-09-13T11:59:10","slug":"qin-brain-dsc-mri","status":"publish","type":"tcia_collection","link":"https:\/\/cm.vastapps.dev\/tcia-collection\/qin-brain-dsc-mri\/","title":{"rendered":"QIN-BRAIN-DSC-MRI"},"featured_media":0,"template":"","citation-tax":[],"cancer_types":["Low &amp; High Grade Glioma"],"citations":[4480,4481,2925],"collection_doi":"10.7937\/K9\/TCIA.2016.5DI84Js8","collection_download_info":"Some data in this collection contains images that could potentially be used to reconstruct a human face.  To safeguard the privacy of participants, users must sign and submit a <a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/4556915\/TCIA%20Restricted%20License%2020220519.pdf?version=1&amp;modificationDate=1652964581655&amp;api=v2\">TCIA Restricted License Agreement<\/a> to <a href=\"mailto:help@cancerimagingarchive.net\">help@cancerimagingarchive.net<\/a> before accessing the data.\n\nClick the Versions tab for more info about data releases.","collection_downloads":[5046],"full_export":"<h2 id=\"GliomaDSCMRIPerfusionDatawithStandardImagingandROIs(QINBRAINDSCMRI)-Summary\">Summary<\/h2><p>This collection contains MR images of both low and high grade glial brain lesions. Data includes post-contrast T1w images with co-registered volumes of dynamic susceptibility contrast (DSC) MR images in DICOM format. Binary regions of interest are also included, in DICOM format, of the lesion, arterial input function, normal appearing white matter, normal appearing cerebral cortex, and whole brain. The data was provided to help facilitate research activities of the National Cancer Institute's (NCI's) Quantitative Imaging Network (QIN). This collection was supported by Grant U01 CA176110.<\/p><h3 id=\"GliomaDSCMRIPerfusionDatawithStandardImagingandROIs(QINBRAINDSCMRI)-AbouttheNCIQIN\">About the NCI QIN<\/h3><p>The mission of the QIN is to improve the role of quantitative imaging for clinical decision making in oncology by developing and validating data acquisition, analysis methods, and tools to tailor treatment for individual patients and predict or monitor the response to drug or radiation therapy. More information is available on the\u00a0<a href=\"https:\/\/wiki.cancerimagingarchive.net\/display\/Public\/Quantitative+Imaging+Network+Collections\" rel=\"nofollow\">Quantitative Imaging Network Collections<\/a>\u00a0page. Interested investigators can apply to the QIN at:\u00a0<a rel=\"nofollow\" href=\"http:\/\/imaging.cancer.gov\/programsandresources\/SpecializedInitiatives\/qin\" class=\"external-link\">Quantitative Imaging for Evaluation of Responses to Cancer Therapies (U01) PAR-11-150<\/a>.<\/p><h3 id=\"GliomaDSCMRIPerfusionDatawithStandardImagingandROIs(QINBRAINDSCMRI)-Acknowledgements\">Acknowledgements<\/h3><p>We would like to acknowledge the individuals and institutions that have provided data for this collection:<span style=\"color: rgb(0,0,0);\"> <strong> Medical College of Wisconsin, Milwaukee, Wisconsin.\u00a0<\/strong>Special thanks to <strong>Kathleen Schmainda, Ph.D<\/strong>. and <strong>Melissa Prah<\/strong>, Department of Radiology, Division of Imaging Science.<\/span><\/p><p><span style=\"color: rgb(0,0,0);\"> <br\/><\/span><\/p><div class=\"tab-style-builtin\"><div class=\"localtabs-macro\"><div class=\"aui-tabs horizontal-tabs\" role=\"application\" data-aui-responsive=\"true\"><ul class=\"tabs-menu\"><li class=\"menu-item bv-localtab  active-tab \"><a href=\"#212673831c44d39e18234868ae8d29536c033721\"><strong>Data Access<\/strong><\/a> <\/li><li class=\"menu-item bv-localtab \"><a href=\"#212673834b3d85d0f9ba4acfbb9e078921b375b2\"><strong>Detailed Description<\/strong><\/a> <\/li><li class=\"menu-item bv-localtab \"><a href=\"#21267383dc04e596a6644ce4868c4a34ec68acea\"><strong>Citations &amp; Data Usage Policy<\/strong><\/a> <\/li><li class=\"menu-item bv-localtab \"><a href=\"#2126738376101f0af4914148bf5c4e7e9fe0f314\"><strong>Versions<\/strong><\/a> <\/li><\/ul><div class=\"tabs-pane  active-pane \" id=\"212673831c44d39e18234868ae8d29536c033721\" active=\"true\" name=\"Data Access\" ><h3 id=\"GliomaDSCMRIPerfusionDatawithStandardImagingandROIs(QINBRAINDSCMRI)-DataAccess\">Data Access<\/h3><p>\nSome data in this collection contains images that could potentially be used to reconstruct a human face.  To safeguard the privacy of participants, users must sign and submit a <a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/4556915\/TCIA%20Restricted%20License%2020220519.pdf?version=1&amp;modificationDate=1652964581655&amp;api=v2\" class=\"external-link\" rel=\"nofollow\">TCIA Restricted License Agreement<\/a> to <a href=\"mailto:help@cancerimagingarchive.net\" class=\"external-link\" rel=\"nofollow\">help@cancerimagingarchive.net<\/a> before accessing the data.<\/p><div class=\"table-wrap\"><table class=\"wrapped confluenceTable\"><colgroup><col\/><col\/><col\/><\/colgroup><tbody><tr><th class=\"confluenceTh\">Data Type<\/th><th class=\"confluenceTh\">Download all or Query\/Filter<\/th><th class=\"confluenceTh\">License<\/th><\/tr><tr><td class=\"confluenceTd\">Images (DICOM, 30.8 GB)<\/td><td class=\"confluenceTd\"><div class=\"content-wrapper\"><p><span class=\"confluence-embedded-file-wrapper\">\u00a0<\/span>\n\n<span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\">\n   <a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/21267383\/QIN-BRAIN-DSC-MRI_2016-03-29.tcia?version=1&amp;modificationDate=1542736923443&amp;api=v2\" rel=\"nofollow\"><button class=\"tcia-btn tcia-download-color\"><i class=\"fa fa-cloud-download\" \/> Download<\/button><\/a>\u00a0\n<\/span>\n\n<span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\">\n   <a href=\"https:\/\/www.cancerimagingarchive.net\/nbia-search\/?CollectionCriteria=QIN-BRAIN-DSC-MRI\" class=\"external-link\" rel=\"nofollow\"><button class=\"tcia-btn tcia-search-color\"><i class=\"fa fa-search\" \/> Search<\/button><\/a>\u00a0\n<\/span><span class=\"confluence-embedded-file-wrapper\"> <\/span>\u00a0<a href=\"https:\/\/www.cancerimagingarchive.net\/nbia-search\/?CollectionCriteria=QIN-BRAIN-DSC-MRI\" class=\"external-link\" rel=\"nofollow\">\u00a0<\/a><\/p><p>(Download requires the\u00a0<a href=\"https:\/\/wiki.cancerimagingarchive.net\/display\/NBIA\/Downloading+TCIA+Images\" rel=\"nofollow\">NBIA Data Retriever<\/a>)<\/p><\/div><\/td><td class=\"confluenceTd\"><div class=\"content-wrapper\"><p><span class=\"confluence-embedded-file-wrapper\">\n<a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/4556915\/TCIA%20Restricted%20License%2020220519.pdf?version=1&amp;modificationDate=1652964581655&amp;api=v2\" class=\"external-link\" rel=\"nofollow\">TCIA Restricted<\/a><br\/><\/span><\/p><\/div><\/td><\/tr><\/tbody><\/table><\/div><p>Click the Versions tab for more info about data releases.<\/p><\/div><div class=\"tabs-pane \" id=\"212673834b3d85d0f9ba4acfbb9e078921b375b2\" name=\"Detailed Description\" ><h3 id=\"GliomaDSCMRIPerfusionDatawithStandardImagingandROIs(QINBRAINDSCMRI)-DetailedDescription\">Detailed Description<\/h3><div class=\"table-wrap\"><table class=\"wrapped confluenceTable\"><colgroup> <col\/> <col\/> <\/colgroup><tbody><tr><th class=\"confluenceTh\"><div class=\"tablesorter-header-inner\"><div class=\"tablesorter-header-inner\"><div class=\"tablesorter-header-inner\"><p>Collection Statistics<\/p><\/div><\/div><\/div><\/th><th class=\"confluenceTh\"><div class=\"tablesorter-header-inner\"><div class=\"tablesorter-header-inner\"><div class=\"tablesorter-header-inner\"><p>Radiology<\/p><\/div><\/div><\/div><\/th><\/tr><tr><td class=\"confluenceTd\"><p>Modalities<\/p><\/td><td class=\"confluenceTd\"><p>MR<\/p><\/td><\/tr><tr><td class=\"confluenceTd\"><p>Number of Participants<\/p><\/td><td class=\"confluenceTd\"><p>49<\/p><\/td><\/tr><tr><td class=\"confluenceTd\"><p>Number of Studies<\/p><\/td><td class=\"confluenceTd\"><p>52<\/p><\/td><\/tr><tr><td class=\"confluenceTd\"><p>Number of Series<\/p><\/td><td class=\"confluenceTd\"><p>349<\/p><\/td><\/tr><tr><td class=\"confluenceTd\"><p>Number of Images<\/p><\/td><td class=\"confluenceTd\"><p>116,778<\/p><\/td><\/tr><tr><td colspan=\"1\" class=\"confluenceTd\">Images Size (GB)<\/td><td colspan=\"1\" class=\"confluenceTd\">30.8<\/td><\/tr><\/tbody><\/table><\/div><\/div><div class=\"tabs-pane \" id=\"21267383dc04e596a6644ce4868c4a34ec68acea\" name=\"Citations BITVOODOO_ANDamp; Data Usage Policy\" ><h3 id=\"GliomaDSCMRIPerfusionDatawithStandardImagingandROIs(QINBRAINDSCMRI)-Citations&amp;DataUsagePolicy\">Citations &amp; Data Usage Policy\u00a0<\/h3><p class=\"auto-cursor-target\">\n<p>\nUsers must abide by the <a href=\"https:\/\/wiki.cancerimagingarchive.net\/x\/c4hF\" class=\"external-link\" rel=\"nofollow\">TCIA Data Usage Policy and Restrictions<\/a>. Attribution should include references to the following citations:\n<\/p><\/p><div class=\"confluence-information-macro confluence-information-macro-information\"><p class=\"title\">Data Citation<\/p><span class=\"aui-icon aui-icon-small aui-iconfont-info confluence-information-macro-icon\"><\/span><div class=\"confluence-information-macro-body\"><p>Kathleen M Schmainda, Melissa A Prah, Jennifer M Connelly, Scott D Rand. (2016). <strong>Glioma DSC-MRI Perfusion Data with Standard Imaging and ROIs\u00a0[ Dataset\u00a0]\u00a0<\/strong>. The Cancer Imaging Archive. DOI:\u00a0<a href=\"http:\/\/doi.org\/10.7937\/K9\/TCIA.2016.5DI84Js8\" class=\"external-link\" rel=\"nofollow\">10.7937\/K9\/TCIA.2016.5DI84Js8<\/a><\/p><\/div><\/div><div class=\"confluence-information-macro confluence-information-macro-information\"><p class=\"title\">Publication Citation<\/p><span class=\"aui-icon aui-icon-small aui-iconfont-info confluence-information-macro-icon\"><\/span><div class=\"confluence-information-macro-body\"><p><span style=\"color: black;\">Schmainda KM, Prah MA, Rand SD, Liu Y, Logan B, Muzi M, Rane SD, Da X, Yen YF, Kalpathy-Cramer J, Chenevert TL, Hoff B, Ross B, Cao Y, Aryal MP, Erickson B, Korfiatis P, Dondlinger T, Bell L, Hu L, Kinahan PE, Quarles CC.<\/span> (2018). <strong>Multisite Concordance of DSC-MRI Analysis for Brain Tumors: Results of a National Cancer Institute Quantitative Imaging Network Collaborative Project.<\/strong> American Journal of Neuroradiology, 39(6), 1008\u20131016. DOI: <a href=\"https:\/\/doi.org\/10.3174\/ajnr.a5675\" class=\"external-link\" rel=\"nofollow\">10.3174\/ajnr.a5675<\/a><\/p><\/div><\/div><div class=\"confluence-information-macro confluence-information-macro-information\"><p class=\"title\">TCIA Citation<\/p><span class=\"aui-icon aui-icon-small aui-iconfont-info confluence-information-macro-icon\"><\/span><div class=\"confluence-information-macro-body\"><p>Clark K, Vendt B, Smith K, Freymann J, Kirby J, Koppel P, Moore S, Phillips S, Maffitt D, Pringle M, Tarbox L, Prior F.\u00a0 (2013)\u00a0<strong>The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository<\/strong>, Journal of Digital Imaging, Volume 26, Number 6, December, 2013, pp 1045-1057. DOI:\u00a0<span style=\"color: rgb(51,51,51);\"> <a href=\"https:\/\/doi.org\/10.1007\/s10278-013-9622-7\" class=\"external-link\" rel=\"nofollow\">10.1007\/s10278-013-9622-7<\/a> <\/span><\/p><\/div><\/div><h3 id=\"GliomaDSCMRIPerfusionDatawithStandardImagingandROIs(QINBRAINDSCMRI)-OtherPublicationsUsingThisData\">Other Publications Using This Data<\/h3><p>TCIA maintains a list of <a href=\"https:\/\/www.cancerimagingarchive.net\/publications\/\" class=\"external-link\" rel=\"nofollow\">publications<\/a> that leverage our data. If you have a publication you'd like to add, please <a href=\"http:\/\/www.cancerimagingarchive.net\/support\/\" class=\"external-link\" rel=\"nofollow\">contact the TCIA Helpdesk<\/a>.<\/p><\/div><div class=\"tabs-pane \" id=\"2126738376101f0af4914148bf5c4e7e9fe0f314\" name=\"Versions\" ><h3 id=\"GliomaDSCMRIPerfusionDatawithStandardImagingandROIs(QINBRAINDSCMRI)-Version3(Current):Updated2019\/08\/28\">Version 3 (Current): Updated 2019\/08\/28<\/h3><div class=\"table-wrap\"><table class=\"wrapped confluenceTable\"><colgroup> <col\/> <col\/> <\/colgroup><tbody><tr><th class=\"confluenceTh\">Data Type<\/th><th class=\"confluenceTh\">Download all or Query\/Filter<\/th><\/tr><tr><td class=\"confluenceTd\">Images (DICOM, 30.8 GB)<\/td><td class=\"confluenceTd\"><div class=\"content-wrapper\"><p>\n\n<span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\">\n   <a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/33948258\/TCIA_CPTAC-PDA-Batch4-2018-10-24.tcia?version=1&amp;modificationDate=1540999807102&amp;api=v2\" rel=\"nofollow\"><button class=\"tcia-btn tcia-download-color\"><i class=\"fa fa-cloud-download\" \/> Download<\/button><\/a>\u00a0\n<\/span>\n\n<span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\">\n   <a href=\"https:\/\/www.cancerimagingarchive.net\/nbia-search\/?CollectionCriteria=QIN-BRAIN-DSC-MRI\" class=\"external-link\" rel=\"nofollow\"><button class=\"tcia-btn tcia-search-color\"><i class=\"fa fa-search\" \/> Search<\/button><\/a>\u00a0\n<\/span><a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/33948258\/TCIA_CPTAC-PDA-Batch4-2018-10-24.tcia?version=1&amp;modificationDate=1540999807102&amp;api=v2\" rel=\"nofollow\">\u00a0<\/a><\/p><p><span>Downloads require the <\/span> <a href=\"https:\/\/wiki.cancerimagingarchive.net\/display\/NBIA\/Downloading+TCIA+Images\" rel=\"nofollow\">NBIA Data Retriever<\/a> <span>.<\/span><\/p><\/div><\/td><\/tr><\/tbody><\/table><\/div><p>Lifted &quot;Limited Access&quot; embargo.<\/p><h3 id=\"GliomaDSCMRIPerfusionDatawithStandardImagingandROIs(QINBRAINDSCMRI)-Version2:Updated2016\/03\/29\">Version 2: Updated 2016\/03\/29<\/h3><div class=\"table-wrap\"><table class=\"wrapped confluenceTable\"><colgroup> <col\/> <col\/> <\/colgroup><tbody><tr><th class=\"confluenceTh\">Data Type<\/th><th class=\"confluenceTh\">Download all or Query\/Filter<\/th><\/tr><tr><td class=\"confluenceTd\">Images (DICOM, 30.8 GB)<\/td><td class=\"confluenceTd\"><div class=\"content-wrapper\"><p>\n\n<span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\">\n   <a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/33948258\/TCIA_CPTAC-PDA-Batch4-2018-10-24.tcia?version=1&amp;modificationDate=1540999807102&amp;api=v2\" rel=\"nofollow\"><button class=\"tcia-btn tcia-download-color\"><i class=\"fa fa-cloud-download\" \/> Download<\/button><\/a>\u00a0\n<\/span><a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/33948258\/TCIA_CPTAC-PDA-Batch4-2018-10-24.tcia?version=1&amp;modificationDate=1540999807102&amp;api=v2\" rel=\"nofollow\">\u00a0<\/a>\u00a0\u00a0<\/p><p><span>Downloads require the <\/span> <a href=\"https:\/\/wiki.cancerimagingarchive.net\/display\/NBIA\/Downloading+TCIA+Images\" rel=\"nofollow\">NBIA Data Retriever<\/a> <span>.<\/span><\/p><\/div><\/td><\/tr><\/tbody><\/table><\/div><p>Added 6 new series, 1 source DSC for each of the 6 MRI platforms.<\/p><h3 id=\"GliomaDSCMRIPerfusionDatawithStandardImagingandROIs(QINBRAINDSCMRI)-Version1:Updated2015\/08\/25\">Version 1: Updated 2015\/08\/25<\/h3><div class=\"table-wrap\"><table class=\"wrapped confluenceTable\"><colgroup> <col\/> <col\/> <\/colgroup><tbody><tr><th colspan=\"1\" class=\"confluenceTh\">Data Type<\/th><th colspan=\"1\" class=\"confluenceTh\">Download all or Query\/Filter<\/th><\/tr><tr><td colspan=\"1\" class=\"confluenceTd\">Images (DICOM, 30.5 GB)<\/td><td colspan=\"1\" class=\"confluenceTd\"><div class=\"content-wrapper\"><p><br\/><\/p><\/div><\/td><\/tr><\/tbody><\/table><\/div><\/div><\/div><\/div><\/div><p>\u00a0\u00a0<\/p>","versions":false,"additional_resources":"","cancer_locations":["Brain"],"collection_page_accessibility":"Public","publications_related":"","version_change_log":"","version_change_log_archived":"","analysis_results":"","collection_status":"Complete","publications_using":"TCIA maintains a list of <a href=\"https:\/\/www.cancerimagingarchive.net\/publications\/\">publications<\/a> that leverage our data. If you have a publication you'd like to add, please <a href=\"http:\/\/www.cancerimagingarchive.net\/support\/\">contact the TCIA Helpdesk<\/a>.","species":["Human"],"collection_title":"Glioma DSC-MRI Perfusion Data with Standard Imaging and ROIs","detailed_description":"","related_analysis_results":false,"subjects":"49","collection_short_title":"QIN-BRAIN-DSC-MRI","data_types":["MR"],"date_updated":"2023-09-13","collection_browse_title":"","supporting_data":false,"collection_featured_image":false,"collection_summary":"This collection contains MR images of both low and high grade glial brain lesions. Data includes post-contrast T1w images with co-registered volumes of dynamic susceptibility contrast (DSC) MR images in DICOM format. Binary regions of interest are also included, in DICOM format, of the lesion, arterial input function, normal appearing white matter, normal appearing cerebral cortex, and whole brain. The data was provided to help facilitate research activities of the National Cancer Institute's (NCI's) Quantitative Imaging Network (QIN). This collection was supported by Grant U01 CA176110.\n<h3>About the NCI QIN<\/h3>\nThe mission of the QIN is to improve the role of quantitative imaging for clinical decision making in oncology by developing and validating data acquisition, analysis methods, and tools to tailor treatment for individual patients and predict or monitor the response to drug or radiation therapy. More information is available on the\u00a0<a href=\"https:\/\/wiki.cancerimagingarchive.net\/display\/Public\/Quantitative+Imaging+Network+Collections\">Quantitative Imaging Network Collections<\/a>\u00a0page. Interested investigators can apply to the QIN at:\u00a0<a href=\"http:\/\/imaging.cancer.gov\/programsandresources\/SpecializedInitiatives\/qin\">Quantitative Imaging for Evaluation of Responses to Cancer Therapies (U01) PAR-11-150<\/a>.","collection_acknowledgements":"We would like to acknowledge the individuals and institutions that have provided data for this collection: <strong> Medical College of Wisconsin, Milwaukee, Wisconsin.\u00a0<\/strong>Special thanks to <strong>Kathleen Schmainda, Ph.D<\/strong>. and <strong>Melissa Prah<\/strong>, Department of Radiology, Division of Imaging Science.\n<br\/>","collection_funding":"","hide_from_browse_table":[],"_links":{"self":[{"href":"https:\/\/cm.vastapps.dev\/api\/v1\/collections\/5599"}],"collection":[{"href":"https:\/\/cm.vastapps.dev\/api\/v1\/collections"}],"about":[{"href":"https:\/\/cm.vastapps.dev\/api\/wp\/v2\/types\/tcia_collection"}],"wp:attachment":[{"href":"https:\/\/cm.vastapps.dev\/api\/wp\/v2\/media?parent=5599"}],"wp:term":[{"taxonomy":"tcia_citation_tax","embeddable":true,"href":"https:\/\/cm.vastapps.dev\/api\/v1\/citation-tax?post=5599"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}