{"id":5775,"date":"2023-09-04T03:37:07","date_gmt":"2023-09-04T03:37:07","guid":{"rendered":"https:\/\/cm.vastapps.dev\/tcia-analysis-result\/crowds-cure-2017\/"},"modified":"2023-09-13T12:09:50","modified_gmt":"2023-09-13T12:09:50","slug":"crowds-cure-2017","status":"publish","type":"tcia_analysis_result","link":"https:\/\/cm.vastapps.dev\/tcia-analysis-result\/crowds-cure-2017\/","title":{"rendered":"CROWDS-CURE-2017"},"featured_media":0,"template":"","cancer_types":["Lung Adenocarcinoma","Renal Clear Cell","Liver","Ovarian"],"citations":[4774,2925],"full_export":"<h2 id=\"CrowdsCureCancer:DatacollectedattheRSNA2017annualmeeting(CrowdsCure2017)-Description\"><strong>Description<\/strong><\/h2><p>Many Cancers routinely identified by imaging haven\u2019t yet benefited from recent advances in computer science. Approaches such as machine learning and deep learning can generate quantitative tumor 3D volumes, complex features and therapy-tracking temporal dynamics. However, cross-disciplinary researchers striving to develop new approaches often lack disease understanding or sufficient contacts within the medical community. Their research can greatly benefit from labeling and annotating basic information in the images such as tumor locations, which are obvious to radiologists.<\/p><p>Crowd-sourcing the creation of publicly-accessible reference data sets could address this challenge. In 2011 the National Cancer Institute funded development of The Cancer Imaging Archive (TCIA), a free and open-access database of medical images. However, most of these collections lack the labeling and annotations needed by image processing researchers for progress in deep learning and radiomics. As a result, TCIA has partnered with the Radiological Society of North America (RSNA) and numerous academic centers to harness the vast knowledge of RSNA meeting attendees to generate these tumor markups.\u00a0 Data sets annotated included CT scans from 352 subjects from the\u00a0<a href=\"https:\/\/wiki.cancerimagingarchive.net\/pages\/viewpage.action?pageId=6881474\">The Cancer Genome Atlas Lung Adenocarcinoma Collection (TCGA-LUAD)<\/a>,\u00a0<a href=\"https:\/\/wiki.cancerimagingarchive.net\/pages\/viewpage.action?pageId=5800386\">The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma Collection (TCGA-KIRC)<\/a>,\u00a0<a href=\"https:\/\/wiki.cancerimagingarchive.net\/pages\/viewpage.action?pageId=6885436\">The Cancer Genome Atlas Liver Hepatocellular Carcinoma Collection (TCGA-LIHC)<\/a>, and\u00a0<a href=\"https:\/\/wiki.cancerimagingarchive.net\/pages\/viewpage.action?pageId=7569497\">The Cancer Genome Atlas Ovarian Cancer Collection (TCGA-OV)<\/a>\u00a0collections on TCIA.<\/p><p>A full explanation of the project can be seen in the Detailed Description tab.<\/p><p><br\/><\/p><div class=\"tab-style-builtin\"><div class=\"localtabs-macro\"><div class=\"aui-tabs horizontal-tabs\" role=\"application\" data-aui-responsive=\"true\"><ul class=\"tabs-menu\"><li class=\"menu-item bv-localtab  active-tab \"><a href=\"#33948774036220c66a5a436f90e4a0b54367bfae\"><strong>Data Access<\/strong><\/a> <\/li><li class=\"menu-item bv-localtab \"><a href=\"#33948774e703f075658f4b0a9f03aeca877d7f4b\"><strong>Detailed Description<\/strong><\/a> <\/li><li class=\"menu-item bv-localtab \"><a href=\"#33948774d170e52bc57d4c67b747b57bf88c460f\"><strong>Citations &amp; Data Usage Policy<\/strong><\/a> <\/li><li class=\"menu-item bv-localtab \"><a href=\"#33948774aa756e3841914e7da45eadb37096a710\"><strong>Versions<\/strong><\/a> <\/li><\/ul><div class=\"tabs-pane  active-pane \" id=\"33948774036220c66a5a436f90e4a0b54367bfae\" active=\"true\" name=\"Data Access\" ><h3 id=\"CrowdsCureCancer:DatacollectedattheRSNA2017annualmeeting(CrowdsCure2017)-DataAccess\"><span style=\"color: rgb(23,43,77);\">Data Access<\/span><\/h3><p><span>Click the<\/span> <strong>Download<\/strong> <span> button\u00a0to save the data.<\/span><\/p><div class=\"table-wrap\"><table class=\"fixed-table wrapped confluenceTable\"><colgroup> <col style=\"width: 278.0px;\"\/> <col style=\"width: 222.0px;\"\/> <\/colgroup><tbody><tr><th class=\"confluenceTh\">Data Type<\/th><th class=\"confluenceTh\">Download all or Query\/Filter<\/th><\/tr><tr><td class=\"confluenceTd\">Images (DICOM, 24.2 GB)<\/td><td class=\"confluenceTd\"><div class=\"content-wrapper\"><p><a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/33948774\/RSNA2017CCC-doiJNLP-e8nBWDCC.tcia?version=1&amp;modificationDate=1585594175888&amp;api=v2\" data-linked-resource-id=\"70222919\" data-linked-resource-version=\"1\" data-linked-resource-type=\"attachment\" data-linked-resource-default-alias=\"RSNA2017CCC-doiJNLP-e8nBWDCC.tcia\" data-linked-resource-content-type=\"application\/x-nbia-manifest-file\" data-linked-resource-container-id=\"33948774\" data-linked-resource-container-version=\"25\"><span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\"><img class=\"confluence-embedded-image confluence-thumbnail\" draggable=\"false\" height=\"30\" src=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/embedded-page\/DOI\/Crowds%20Cure%20Cancer:%20Data%20collected%20at%20the%20RSNA%202017%20annual%20meeting%20(Crowds-Cure-2017)\/tcia_wiki_download_button.png?api=v2\"><\/span><\/a><\/p><p>\u00a0(Open this *.tcia manifest with <a href=\"https:\/\/wiki.cancerimagingarchive.net\/display\/NBIA\/Downloading+TCIA+Images\" style=\"text-decoration: underline;text-align: left;\" rel=\"nofollow\">NBIA Data Retriever<\/a>)<\/p><\/div><\/td><\/tr><tr><td colspan=\"1\" class=\"confluenceTd\">Image Annotations (CSV)<\/td><td colspan=\"1\" class=\"confluenceTd\"><div class=\"content-wrapper\"><p><a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/33948774\/CrowdsCureCancer2017Annotations.csv?version=1&amp;modificationDate=1526921134720&amp;api=v2\" data-linked-resource-id=\"37225065\" data-linked-resource-version=\"1\" data-linked-resource-type=\"attachment\" data-linked-resource-default-alias=\"CrowdsCureCancer2017Annotations.csv\" data-linked-resource-content-type=\"text\/csv\" data-linked-resource-container-id=\"33948774\" data-linked-resource-container-version=\"25\"><span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\"><img class=\"confluence-embedded-image confluence-thumbnail\" draggable=\"false\" height=\"30\" src=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/embedded-page\/DOI\/Crowds%20Cure%20Cancer:%20Data%20collected%20at%20the%20RSNA%202017%20annual%20meeting%20(Crowds-Cure-2017)\/tcia_wiki_download_button.png?api=v2\"><\/span><\/a><\/p><\/div><\/td><\/tr><tr><td colspan=\"1\" class=\"confluenceTd\">DICOM-SR files (ZIP, 3.7 Mb) *<\/td><td colspan=\"1\" class=\"confluenceTd\"><div class=\"content-wrapper\"><p><a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/33948774\/CrowdsCureCancer-dicomsrfiles_20180830.zip?version=1&amp;modificationDate=1541171270115&amp;api=v2\" data-linked-resource-id=\"44499361\" data-linked-resource-version=\"1\" data-linked-resource-type=\"attachment\" data-linked-resource-default-alias=\"CrowdsCureCancer-dicomsrfiles_20180830.zip\" data-nice-type=\"Zip Archive\" data-linked-resource-content-type=\"application\/zip\" data-linked-resource-container-id=\"33948774\" data-linked-resource-container-version=\"25\"><span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\"><img class=\"confluence-embedded-image confluence-thumbnail\" draggable=\"false\" alt=\"DICOM SR files\" height=\"30\" src=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/embedded-page\/DOI\/Crowds%20Cure%20Cancer:%20Data%20collected%20at%20the%20RSNA%202017%20annual%20meeting%20(Crowds-Cure-2017)\/tcia_wiki_download_button.png?api=v2\"><\/span><\/a><\/p><\/div><\/td><\/tr><tr><td colspan=\"1\" class=\"confluenceTd\">Clinical Data (CSV, 53kb) **<\/td><td colspan=\"1\" class=\"confluenceTd\"><div class=\"content-wrapper\"><p><a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/33948774\/ccc2017clinical.csv?version=1&amp;modificationDate=1544564445857&amp;api=v2\" data-linked-resource-id=\"46334044\" data-linked-resource-version=\"1\" data-linked-resource-type=\"attachment\" data-linked-resource-default-alias=\"ccc2017clinical.csv\" data-linked-resource-content-type=\"text\/csv\" data-linked-resource-container-id=\"33948774\" data-linked-resource-container-version=\"25\"><span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\"><img class=\"confluence-embedded-image confluence-thumbnail\" draggable=\"false\" height=\"30\" src=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/embedded-page\/DOI\/Crowds%20Cure%20Cancer:%20Data%20collected%20at%20the%20RSNA%202017%20annual%20meeting%20(Crowds-Cure-2017)\/tcia_wiki_download_button.png?api=v2\"><\/span><\/a><\/p><\/div><\/td><\/tr><\/tbody><\/table><\/div><p>* The <a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/33948774\/CrowdsCureCancerCSV_converttoDICOMSR_20180830.zip?version=1&amp;modificationDate=1541172112078&amp;api=v2\" data-linked-resource-id=\"44499362\" data-linked-resource-version=\"1\" data-linked-resource-type=\"attachment\" data-linked-resource-default-alias=\"CrowdsCureCancerCSV_converttoDICOMSR_20180830.zip\" data-nice-type=\"Zip Archive\" data-linked-resource-content-type=\"application\/zip\" data-linked-resource-container-id=\"33948774\" data-linked-resource-container-version=\"25\">conversion\u00a0<span style=\"color: rgb(33,33,33);\">XSLT and Makefile<\/span> <\/a> <span style=\"color: rgb(33,33,33);\">depends on pixelmed.jar as a DICOM toolkit,\u00a0<\/span> <span style=\"color: rgb(33,33,33);\">and dicom3tools, dcsrdump and dciodvfy for validation.<\/span><\/p><p><span style=\"color: rgb(33,33,33);\">** Because all subjects were pulled from The Cancer Genome Atlas cohorts, clinical data was available through the NCI Genomic Data Commons.\u00a0 A CSV dump of that data is provided here for convenience.<\/span><\/p><p><span style=\"color: rgb(23,43,77);\">Please contact <a rel=\"nofollow\" href=\"mailto:help@cancerimagingarchive.net\" class=\"external-link\">help@cancerimagingarchive.net<\/a>\u00a0 with any questions regarding usage.<\/span><\/p><p><strong><span style=\"color: rgb(29,28,29);text-decoration: none;\">Collections Used in this Third Party Analysis<\/span><\/strong><br style=\"text-decoration: none;text-align: left;\"\/><span style=\"color: rgb(29,28,29);text-decoration: none;\">Below is a list of the Collections used in these analyses:<\/span><\/p><ul><li><a href=\"https:\/\/wiki.cancerimagingarchive.net\/pages\/viewpage.action?pageId=6881474\">The Cancer Genome Atlas Lung Adenocarcinoma Collection (TCGA-LUAD)<\/a><\/li><li><a href=\"https:\/\/wiki.cancerimagingarchive.net\/pages\/viewpage.action?pageId=5800386\">The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma Collection (TCGA-KIRC)<\/a><\/li><li><a href=\"https:\/\/wiki.cancerimagingarchive.net\/pages\/viewpage.action?pageId=6885436\">The Cancer Genome Atlas Liver Hepatocellular Carcinoma Collection (TCGA-LIHC)<\/a><\/li><li><a href=\"https:\/\/wiki.cancerimagingarchive.net\/pages\/viewpage.action?pageId=7569497\">The Cancer Genome Atlas Ovarian Cancer Collection (TCGA-OV)<\/a>\u00a0<\/li><\/ul><\/div><div class=\"tabs-pane \" id=\"33948774e703f075658f4b0a9f03aeca877d7f4b\" name=\"Detailed Description\" ><h3 id=\"CrowdsCureCancer:DatacollectedattheRSNA2017annualmeeting(CrowdsCure2017)-DetailedDescription\">Detailed Description<\/h3><p><strong>Booth posters<\/strong><\/p><p><br\/><\/p><span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\"><img class=\"confluence-embedded-image\" draggable=\"false\" width=\"800\" src=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/embedded-page\/DOI\/Crowds%20Cure%20Cancer:%20Data%20collected%20at%20the%20RSNA%202017%20annual%20meeting%20(Crowds-Cure-2017)\/quad.png?api=v2\"><\/span><p><br\/><\/p><\/div><div class=\"tabs-pane \" id=\"33948774d170e52bc57d4c67b747b57bf88c460f\" name=\"Citations BITVOODOO_ANDamp; Data Usage Policy\" ><h3 id=\"CrowdsCureCancer:DatacollectedattheRSNA2017annualmeeting(CrowdsCure2017)-Citations&amp;DataUsagePolicy\">Citations &amp; Data Usage Policy\u00a0<\/h3><p class=\"auto-cursor-target\">\n<p>\nUsers of this data must abide by the <a href=\"https:\/\/wiki.cancerimagingarchive.net\/x\/c4hF\" class=\"external-link\" re=\"nofollow\" rel=\"nofollow\">TCIA Data Usage Policy<\/a> and the <a href=\"https:\/\/creativecommons.org\/licenses\/by\/3.0\/\" class=\"external-link\" rel=\"nofollow\">Creative Commons Attribution 3.0 Unported License<\/a> under which it has been published. Attribution should include references to the following citations:\n<\/p><\/p><div class=\"confluence-information-macro confluence-information-macro-information\"><p class=\"title\">Data Citation<\/p><span class=\"aui-icon aui-icon-small aui-iconfont-info confluence-information-macro-icon\"><\/span><div class=\"confluence-information-macro-body\">Kalpathy-Cramer, J., Beers, A., Mamonov, A., Ziegler, E., Lewis, R., Almeida, A. B., Harris, G., Pieper, S., Sharma, A., Tarbox, L., Tobler, J., Prior, F., Flanders, A., Dulkowski, J., Fevrier-Sullivan, B., Jaffe, C., Freymann, J., &amp; Kirby, J. (2019). <strong>Crowds Cure Cancer: Crowdsourced data collected at the RSNA 2017 annual meeting [Data set]<\/strong>. The Cancer Imaging Archive. <a href=\"https:\/\/doi.org\/10.7937\/K9\/TCIA.2018.OW73VLO2\" class=\"external-link\" rel=\"nofollow\">https:\/\/doi.org\/10.7937\/K9\/TCIA.2018.OW73VLO2<\/a><\/div><\/div><div class=\"confluence-information-macro confluence-information-macro-information\"><p class=\"title\">TCIA Citation<\/p><span class=\"aui-icon aui-icon-small aui-iconfont-info confluence-information-macro-icon\"><\/span><div class=\"confluence-information-macro-body\">Clark, K., Vendt, B., Smith, K., Freymann, J., Kirby, J., Koppel, P., Moore, S., Phillips, S., Maffitt, D., Pringle, M., Tarbox, L., &amp; Prior, F. (2013). <strong>The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository<\/strong>. Journal of Digital Imaging, 26(6), 1045\u20131057. <a href=\"https:\/\/doi.org\/10.1007\/s10278-013-9622-7\" class=\"external-link\" rel=\"nofollow\">https:\/\/doi.org\/10.1007\/s10278-013-9622-7<\/a>\u00a0<\/div><\/div><h3 id=\"CrowdsCureCancer:DatacollectedattheRSNA2017annualmeeting(CrowdsCure2017)-OtherPublicationsUsingThisData\">Other Publications Using This Data<\/h3><p><span>TCIA maintains<\/span> <a rel=\"nofollow\" href=\"https:\/\/www.cancerimagingarchive.net\/publications\/\" class=\"external-link\"> a list of publications<\/a> <span> that leverage TCIA data. <\/span> If you have a manuscript you'd like to add please<a rel=\"nofollow\" class=\"external-link\" href=\"http:\/\/www.cancerimagingarchive.net\/support\/\"> contact the TCIA Helpdesk<\/a>.<\/p><\/div><div class=\"tabs-pane \" id=\"33948774aa756e3841914e7da45eadb37096a710\" name=\"Versions\" ><h3 id=\"CrowdsCureCancer:DatacollectedattheRSNA2017annualmeeting(CrowdsCure2017)-Version1(Current):2018\/05\/17\">Version 1 (Current): 2018\/05\/17<\/h3><div class=\"table-wrap\"><table class=\"wrapped fixed-table confluenceTable\"><colgroup> <col style=\"width: 184.0px;\"\/> <col style=\"width: 228.0px;\"\/> <\/colgroup><tbody><tr><th class=\"confluenceTh\">Data Type<\/th><th class=\"confluenceTh\">Download all or Query\/Filter<\/th><\/tr><tr><td class=\"confluenceTd\">Images (DICOM, 24.2 GB)<\/td><td class=\"confluenceTd\"><div class=\"content-wrapper\"><p><a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/33948774\/RSNA2017CCC-doiJNLP-e8nBWDCC.tcia?version=1&amp;modificationDate=1585594175888&amp;api=v2\" data-linked-resource-id=\"70222919\" data-linked-resource-version=\"1\" data-linked-resource-type=\"attachment\" data-linked-resource-default-alias=\"RSNA2017CCC-doiJNLP-e8nBWDCC.tcia\" data-linked-resource-content-type=\"application\/x-nbia-manifest-file\" data-linked-resource-container-id=\"33948774\" data-linked-resource-container-version=\"25\"><span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\"><img class=\"confluence-embedded-image\" draggable=\"false\" height=\"30\" src=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/embedded-page\/DOI\/Crowds%20Cure%20Cancer:%20Data%20collected%20at%20the%20RSNA%202017%20annual%20meeting%20(Crowds-Cure-2017)\/tcia_wiki_download_button.png?api=v2\"><\/span><\/a><br\/>\u00a0(Open this *.tcia manifest with <a rel=\"nofollow\" href=\"https:\/\/wiki.cancerimagingarchive.net\/display\/NBIA\/Downloading+TCIA+Images\" style=\"text-decoration: underline;text-align: left;\">NBIA Data Retriever<\/a>)<\/p><\/div><\/td><\/tr><tr><td class=\"confluenceTd\">Image Annotations (CSV)<\/td><td class=\"confluenceTd\"><div class=\"content-wrapper\"><p><a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/33948774\/CrowdsCureCancer2017Annotations.csv?version=1&amp;modificationDate=1526921134720&amp;api=v2\" data-linked-resource-id=\"37225065\" data-linked-resource-version=\"1\" data-linked-resource-type=\"attachment\" data-linked-resource-default-alias=\"CrowdsCureCancer2017Annotations.csv\" data-linked-resource-content-type=\"text\/csv\" data-linked-resource-container-id=\"33948774\" data-linked-resource-container-version=\"25\"><span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\"><img class=\"confluence-embedded-image confluence-thumbnail\" draggable=\"false\" height=\"30\" src=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/embedded-page\/DOI\/Crowds%20Cure%20Cancer:%20Data%20collected%20at%20the%20RSNA%202017%20annual%20meeting%20(Crowds-Cure-2017)\/tcia_wiki_download_button.png?api=v2\"><\/span><\/a><\/p><\/div><\/td><\/tr><tr><td colspan=\"1\" class=\"confluenceTd\">DICOM-SR files (ZIP) *<\/td><td colspan=\"1\" class=\"confluenceTd\"><div class=\"content-wrapper\"><p><a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/33948774\/CrowdsCureCancer-dicomsrfiles_20180830.zip?version=1&amp;modificationDate=1541171270115&amp;api=v2\" data-linked-resource-id=\"44499361\" data-linked-resource-version=\"1\" data-linked-resource-type=\"attachment\" data-linked-resource-default-alias=\"CrowdsCureCancer-dicomsrfiles_20180830.zip\" data-nice-type=\"Zip Archive\" data-linked-resource-content-type=\"application\/zip\" data-linked-resource-container-id=\"33948774\" data-linked-resource-container-version=\"25\"><span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\"><img class=\"confluence-embedded-image confluence-thumbnail\" draggable=\"false\" alt=\"DICOM SR files\" height=\"30\" src=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/embedded-page\/DOI\/Crowds%20Cure%20Cancer:%20Data%20collected%20at%20the%20RSNA%202017%20annual%20meeting%20(Crowds-Cure-2017)\/tcia_wiki_download_button.png?api=v2\"><\/span><\/a><\/p><\/div><\/td><\/tr><tr><td colspan=\"1\" class=\"confluenceTd\">Clinical Data (CSV) **<\/td><td colspan=\"1\" class=\"confluenceTd\"><div class=\"content-wrapper\"><p><a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/33948774\/ccc2017clinical.csv?version=1&amp;modificationDate=1544564445857&amp;api=v2\" data-linked-resource-id=\"46334044\" data-linked-resource-version=\"1\" data-linked-resource-type=\"attachment\" data-linked-resource-default-alias=\"ccc2017clinical.csv\" data-linked-resource-content-type=\"text\/csv\" data-linked-resource-container-id=\"33948774\" data-linked-resource-container-version=\"25\"><span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\"><img class=\"confluence-embedded-image confluence-thumbnail\" draggable=\"false\" height=\"30\" src=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/embedded-page\/DOI\/Crowds%20Cure%20Cancer:%20Data%20collected%20at%20the%20RSNA%202017%20annual%20meeting%20(Crowds-Cure-2017)\/tcia_wiki_download_button.png?api=v2\"><\/span><\/a><\/p><\/div><\/td><\/tr><\/tbody><\/table><\/div><p>* The <a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/33948774\/CrowdsCureCancerCSV_converttoDICOMSR_20180830.zip?version=1&amp;modificationDate=1541172112078&amp;api=v2\" data-linked-resource-id=\"44499362\" data-linked-resource-version=\"1\" data-linked-resource-type=\"attachment\" data-linked-resource-default-alias=\"CrowdsCureCancerCSV_converttoDICOMSR_20180830.zip\" data-nice-type=\"Zip Archive\" data-linked-resource-content-type=\"application\/zip\" data-linked-resource-container-id=\"33948774\" data-linked-resource-container-version=\"25\">conversion\u00a0<span style=\"color: rgb(33,33,33);\">XSLT and Makefile<\/span> <\/a> <span style=\"color: rgb(33,33,33);\">depends on pixelmed.jar as a DICOM toolkit,\u00a0<\/span> <span style=\"color: rgb(33,33,33);\">and dicom3tools, dcsrdump and dciodvfy for validation.<\/span><\/p><p><span style=\"color: rgb(33,33,33);\">** Because all subjects were pulled from The Cancer Genome Atlas cohorts, clinical data was available through the NCI Genomic Data Commons.\u00a0 A CSV dump of that data is provided here for convenience.<\/span><\/p><\/div><\/div><\/div><\/div>","make_new_version_button":"","related_collections":["TCGA-LUAD","TCGA-KIRC","TCGA-LIHC","TCGA-OV"],"result_doi":"10.7937\/K9\/TCIA.2018.OW73VLO2","versions":false,"cancer_locations":["Chest","Kidney","Liver","Ovary"],"publications_related":"","result_download_info":"Click the <strong>Download<\/strong>  button\u00a0to save the data.\n\n* The <a data-linked-resource-container-id=\"33948774\" data-linked-resource-container-version=\"25\" data-linked-resource-content-type=\"application\/zip\" data-linked-resource-default-alias=\"CrowdsCureCancerCSV_converttoDICOMSR_20180830.zip\" data-linked-resource-id=\"44499362\" data-linked-resource-type=\"attachment\" data-linked-resource-version=\"1\" data-nice-type=\"Zip Archive\" download=\"\" href=\"\/wp-content\/uploads\/CrowdsCureCancerCSV_converttoDICOMSR_20180830.zip\" target=\"_blank\">conversion\u00a0XSLT and Makefile <\/a> depends on pixelmed.jar as a DICOM toolkit,\u00a0 and dicom3tools, dcsrdump and dciodvfy for validation.\n** Because all subjects were pulled from The Cancer Genome Atlas cohorts, clinical data was available through the NCI Genomic Data Commons.\u00a0 A CSV dump of that data is provided here for convenience.\nPlease contact <a href=\"mailto:help@cancerimagingarchive.net\">help@cancerimagingarchive.net<\/a>\u00a0 with any questions regarding usage.\n<strong>Collections Used in this Third Party Analysis<\/strong><br\/>Below is a list of the Collections used in these analyses:\n<ul><li><a href=\"\/pages\/viewpage.action?pageId=6881474\">The Cancer Genome Atlas Lung Adenocarcinoma Collection (TCGA-LUAD)<\/a><\/li><li><a href=\"\/pages\/viewpage.action?pageId=5800386\">The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma Collection (TCGA-KIRC)<\/a><\/li><li><a href=\"\/pages\/viewpage.action?pageId=6885436\">The Cancer Genome Atlas Liver Hepatocellular Carcinoma Collection (TCGA-LIHC)<\/a><\/li><li><a href=\"\/pages\/viewpage.action?pageId=7569497\">The Cancer Genome Atlas Ovarian Cancer Collection (TCGA-OV)<\/a>\u00a0<\/li><\/ul>","result_downloads":[5394,5395,5396,5397],"result_page_accessibility":"Public","version_change_log_archived":"","additional_resources":"","date_updated":"2018-05-17","publications_using":"TCIA maintains <a href=\"https:\/\/www.cancerimagingarchive.net\/publications\/\"> a list of publications<\/a>  that leverage TCIA data.  If you have a manuscript you'd like to add please<a href=\"http:\/\/www.cancerimagingarchive.net\/support\/\"> contact the TCIA Helpdesk<\/a>.","result_title":"Crowds Cure Cancer: Data collected at the RSNA 2017 annual meeting","subjects":"352","detailed_description":"<strong>Booth posters<\/strong>\n<br\/>\n<div class=\"cm-content-image\"><a href=\"\/wp-content\/uploads\/quad.png\" rel=\"prettyPhoto noopener\" target=\"_blank\"><img src=\"\/wp-content\/uploads\/quad.png\"\/><\/a><\/div>\n<br\/>","result_short_title":"Crowds-Cure-2017","supporting_data":["Lesion measurements"],"version_change_log":"","collections":"","result_browse_title":"","version_number":[],"collection_downloads":false,"result_summary":"Many Cancers routinely identified by imaging haven\u2019t yet benefited from recent advances in computer science. Approaches such as machine learning and deep learning can generate quantitative tumor 3D volumes, complex features and therapy-tracking temporal dynamics. However, cross-disciplinary researchers striving to develop new approaches often lack disease understanding or sufficient contacts within the medical community. Their research can greatly benefit from labeling and annotating basic information in the images such as tumor locations, which are obvious to radiologists.\nCrowd-sourcing the creation of publicly-accessible reference data sets could address this challenge. In 2011 the National Cancer Institute funded development of The Cancer Imaging Archive (TCIA), a free and open-access database of medical images. However, most of these collections lack the labeling and annotations needed by image processing researchers for progress in deep learning and radiomics. As a result, TCIA has partnered with the Radiological Society of North America (RSNA) and numerous academic centers to harness the vast knowledge of RSNA meeting attendees to generate these tumor markups.\u00a0 Data sets annotated included CT scans from 352 subjects from the\u00a0<a href=\"\/pages\/viewpage.action?pageId=6881474\">The Cancer Genome Atlas Lung Adenocarcinoma Collection (TCGA-LUAD)<\/a>,\u00a0<a href=\"\/pages\/viewpage.action?pageId=5800386\">The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma Collection (TCGA-KIRC)<\/a>,\u00a0<a href=\"\/pages\/viewpage.action?pageId=6885436\">The Cancer Genome Atlas Liver Hepatocellular Carcinoma Collection (TCGA-LIHC)<\/a>, and\u00a0<a href=\"\/pages\/viewpage.action?pageId=7569497\">The Cancer Genome Atlas Ovarian Cancer Collection (TCGA-OV)<\/a>\u00a0collections on TCIA.\nA full explanation of the project can be seen in the Detailed Description tab.\n<br\/>","result_featured_image":false,"result_acknowledgements":"","hide_from_browse_table":[],"_links":{"self":[{"href":"https:\/\/cm.vastapps.dev\/api\/v1\/analysis-results\/5775"}],"collection":[{"href":"https:\/\/cm.vastapps.dev\/api\/v1\/analysis-results"}],"about":[{"href":"https:\/\/cm.vastapps.dev\/api\/wp\/v2\/types\/tcia_analysis_result"}],"wp:attachment":[{"href":"https:\/\/cm.vastapps.dev\/api\/wp\/v2\/media?parent=5775"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}