{"id":5762,"date":"2023-09-04T03:36:24","date_gmt":"2023-09-04T03:36:24","guid":{"rendered":"https:\/\/cm.vastapps.dev\/tcia-analysis-result\/radiomics-outcome-prediction-in-oropharyngeal-cancer\/"},"modified":"2023-09-13T12:09:20","modified_gmt":"2023-09-13T12:09:20","slug":"radiomics-outcome-prediction-in-oropharyngeal-cancer","status":"publish","type":"tcia_analysis_result","link":"https:\/\/cm.vastapps.dev\/tcia-analysis-result\/radiomics-outcome-prediction-in-oropharyngeal-cancer\/","title":{"rendered":"RADIOMICS-OUTCOME-PREDICTION-IN-OROPHARYNGEAL-CANCER"},"featured_media":0,"template":"","cancer_types":false,"citations":[4770,4771,2925],"full_export":"<h2 id=\"RadiomicsoutcomepredictioninOropharyngealcancer-Description\">Description<\/h2><p class=\"x_MsoNormal\"><span style=\"color: rgb(51,51,51);\">This study describes a subset of the <a href=\"https:\/\/wiki.cancerimagingarchive.net\/display\/Public\/HNSCC\" rel=\"nofollow\">HNSCC<\/a>\u00a0collection on TCIA.\u00a0 <\/span><\/p><p class=\"x_MsoNormal\"><span style=\"color: rgb(51,51,51);\">There is an unmet need for integrating quantitative imaging biomarkers into current risk stratification tools and\u00a0to explore the correlation between radiomics features \u2013alone or in combination with clinical prognosticators- and tumor outcome.\u00a0 Clinical meta-data and matched baseline contrast-enhanced computed tomography (CECT) scans were used to build a\u00a0cohort of 495 oropharyngeal cancer (OPC) patients\u00a0treated\u00a0between 2005 and 2012.\u00a0\u00a0Expert radiation oncologists manually segmented primary and nodal disease gross volumes (GTVp &amp; GTVn). Structures were named per the American Association of Physicists in Medicine (AAPM) TG-263 recommendations, then retrieved in RT-STRUCT format. Matched patient, disease, treatment and outcomes data were obtained. Radiomics analysis was performed using an open-source institutionally-developed software that runs on Matlab platform.\u00a0 <br\/><\/span><\/p><p>A related dataset is here: <strong>Data from Head and Neck Cancer CT Atlas<\/strong>. DOI: <a rel=\"nofollow\" class=\"external-link\" href=\"http:\/\/doi.org\/10.7937\/K9\/TCIA.2017.umz8dv6s\">10.7937\/K9\/TCIA.2017.umz8dv6s<\/a>\u00a0<\/p><h3 class=\"x_MsoNormal\" id=\"RadiomicsoutcomepredictioninOropharyngealcancer-Acknowledgements:\"><span style=\"color: rgb(51,51,51);\">Acknowledgements:<\/span><\/h3><p><span style=\"color: rgb(51,51,51);\">This research was supported by the Andrew Sabin Family Foundation; Dr. Fuller is a Sabin Family Foundation Fellow. Drs. Mohamed and Fuller receive funding support from the National Institutes of Health (NIH)\/National Institute for Dental and Craniofacial Research (NIDCR) (R01DE025248) and the National Institutes of Health (NIH)\/National Cancer Institute (NCI) (1R01CA214825-01). <\/span><\/p><p><span style=\"color: rgb(51,51,51);\">Dr. Fuller received\/(s) grant and\/or salary support from the NIH\/NCI Head and Neck Specialized Programs of Research Excellence (SPORE) Developmental Research Program Career Development Award (P50CA097007-10); the NCI Paul Calabresi Clinical Oncology Program Award (K12 CA088084-06); a General Electric Healthcare\/MD Anderson Center for Advanced Biomedical Imaging In-Kind Award;\u00a0 an Elekta AB\/MD Anderson Department of Radiation Oncology Seed Grant; the Center for Radiation Oncology Research (CROR) at MD Anderson Cancer Center Seed Grant; the MD Anderson Institutional Research Grant (IRG) Program; and the NIH\/NCI Cancer Center Support (Core) Grant CA016672 to The University of Texas MD Anderson Cancer Center (P30 CA016672). <\/span><\/p><p><span style=\"color: rgb(51,51,51);\">Dr. Elhalawani was directly funded in part by a philanthropic gift from the Family of Paul W. Beach given to Dr. Gunn for patient-outcome database construction.<\/span><\/p><p><br\/><\/p><div class=\"tab-style-builtin\"><div class=\"localtabs-macro\"><div class=\"aui-tabs horizontal-tabs\" role=\"application\" data-aui-responsive=\"true\"><ul class=\"tabs-menu\"><li class=\"menu-item bv-localtab  active-tab \"><a href=\"#33948240a3c67861fb6b4c189dc81ea7713e1ff8\"><strong>Data Access<\/strong><\/a> <\/li><li class=\"menu-item bv-localtab \"><a href=\"#339482406c30ff9794da4221abe6f656d6bb4283\"><strong>Detailed Description<\/strong><\/a> <\/li><li class=\"menu-item bv-localtab \"><a href=\"#339482408fd9040471bf43848819b5906d1a57d2\"><strong>Citations &amp; Data Usage Policy<\/strong><\/a> <\/li><li class=\"menu-item bv-localtab \"><a href=\"#3394824034d0ca9df53d4b9294ff4d01b5132597\"><strong>Versions<\/strong><\/a> <\/li><\/ul><div class=\"tabs-pane  active-pane \" id=\"33948240a3c67861fb6b4c189dc81ea7713e1ff8\" active=\"true\" name=\"Data Access\" ><h3 id=\"RadiomicsoutcomepredictioninOropharyngealcancer-DataAccess\"><span style=\"color: rgb(23,43,77);\">Data Access<\/span><\/h3><p><span style=\"color: rgb(23,43,77);\">\nSome data in this collection contains images that could potentially be used to reconstruct a human face.  To safeguard the privacy of participants, users must sign and submit a <a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/4556915\/TCIA%20Restricted%20License%2020220519.pdf?version=1&amp;modificationDate=1652964581655&amp;api=v2\" class=\"external-link\" rel=\"nofollow\">TCIA Restricted License Agreement<\/a> to <a href=\"mailto:help@cancerimagingarchive.net\" class=\"external-link\" rel=\"nofollow\">help@cancerimagingarchive.net<\/a> before accessing the data.<\/span><\/p><div class=\"table-wrap\"><table class=\"fixed-table wrapped confluenceTable\"><colgroup><col style=\"width: 278.0px;\"\/><col style=\"width: 303.0px;\"\/><col style=\"width: 303.0px;\"\/><\/colgroup><tbody><tr><th class=\"confluenceTh\">Data Type<\/th><th class=\"confluenceTh\">Download all or Query\/Filter<\/th><th class=\"confluenceTh\">License<\/th><\/tr><tr><td class=\"confluenceTd\">Images - 814 series (DICOM, 51.6 GB)<\/td><td class=\"confluenceTd\"><div class=\"content-wrapper\"><p>\n\n<span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\">\n   <a href=\"https:\/\/wiki.cancerimagingarchive.net\/display\/DOI\/Radiomics+outcome+prediction+in+Oropharyngeal+cancer?preview=%2F33948240%2F70222837%2Fmanifest-1585330520084.tcia\" rel=\"nofollow\"><button class=\"tcia-btn tcia-download-color\"><i class=\"fa fa-cloud-download\" \/> Download<\/button><\/a>\u00a0\n<\/span><\/p><p class=\"auto-cursor-target\">(Download requires <span style=\"color: rgb(23,43,77);\"><a style=\"text-decoration: underline;\" rel=\"nofollow\" href=\"https:\/\/wiki.cancerimagingarchive.net\/display\/NBIA\/Downloading+TCIA+Images\">NBIA Data Retriever<\/a><\/span><span style=\"color: rgb(23,43,77);\">)<\/span><\/p><\/div><\/td><td class=\"confluenceTd\"><div class=\"content-wrapper\"><p>\n<a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/4556915\/TCIA%20Restricted%20License%2020220519.pdf?version=1&amp;modificationDate=1652964581655&amp;api=v2\" class=\"external-link\" rel=\"nofollow\">TCIA Restricted<\/a><\/p><\/div><\/td><\/tr><tr><td class=\"confluenceTd\">Clinical Data (CSV, 86 kB)<\/td><td class=\"confluenceTd\"><div class=\"content-wrapper\"><p>\n\n<span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\">\n   <a href=\"https:\/\/wiki.cancerimagingarchive.net\/display\/DOI\/Radiomics+outcome+prediction+in+Oropharyngeal+cancer?preview=%2F33948240%2F133071076%2FRadiomics_Outcome_Prediction_in_OPC_ASRM_corrected.csv\" rel=\"nofollow\"><button class=\"tcia-btn tcia-download-color\"><i class=\"fa fa-cloud-download\" \/> Download<\/button><\/a>\u00a0\n<\/span><\/p><\/div><\/td><td class=\"confluenceTd\"><div class=\"content-wrapper\"><p class=\"auto-cursor-target\">\n<a href=\"https:\/\/creativecommons.org\/licenses\/by\/4.0\/\" class=\"external-link\" rel=\"nofollow\">CC BY 4.0<\/a><\/p><\/div><\/td><\/tr><\/tbody><\/table><\/div><p><span style=\"color: rgb(23,43,77);\">Please contact <a class=\"external-link\" rel=\"nofollow\" href=\"mailto:help@cancerimagingarchive.net\">help@cancerimagingarchive.net<\/a>\u00a0 with any questions regarding usage.<\/span><\/p><\/div><div class=\"tabs-pane \" id=\"339482406c30ff9794da4221abe6f656d6bb4283\" name=\"Detailed Description\" ><h3 id=\"RadiomicsoutcomepredictioninOropharyngealcancer-DetailedDescription\">Detailed Description<\/h3><div class=\"table-wrap\"><table class=\"wrapped confluenceTable\"><colgroup><col\/><col\/><\/colgroup><tbody><tr><th class=\"confluenceTh\">Image Statistics<\/th><th class=\"confluenceTh\">Radiology<\/th><\/tr><tr><td colspan=\"1\" class=\"confluenceTd\"><p>Modalities<\/p><\/td><td style=\"text-align: center;\" colspan=\"1\" class=\"confluenceTd\"><p>CT, RTSTRUCT<\/p><\/td><\/tr><tr><td class=\"confluenceTd\"><p>Number of Patients<\/p><\/td><td style=\"text-align: center;\" class=\"confluenceTd\">412<\/td><\/tr><tr><td class=\"confluenceTd\"><p>Number of Studies<\/p><\/td><td style=\"text-align: center;\" class=\"confluenceTd\">412<\/td><\/tr><tr><td class=\"confluenceTd\"><p>Number of Series<\/p><\/td><td style=\"text-align: center;\" class=\"confluenceTd\">814<\/td><\/tr><tr><td colspan=\"1\" class=\"confluenceTd\"><p>Number of Images<\/p><\/td><td style=\"text-align: center;\" colspan=\"1\" class=\"confluenceTd\">104,558<\/td><\/tr><tr><td colspan=\"1\" class=\"confluenceTd\">Images Size (GB)<\/td><td style=\"text-align: center;\" colspan=\"1\" class=\"confluenceTd\">51.6<\/td><\/tr><\/tbody><\/table><\/div><p><em><u>Methods<\/u><\/em><\/p><p>Diagnostic contrast-enhanced computed tomography (CECT) Digital Imaging and Communications in Medicine (DICOM) files prior to any active intervention were collected for 495 OPC patients treated at our institution between 2005 and 2012<strong>. <\/strong>Expert radiation oncologists manually segmented primary and nodal disease gross volumes (GTVp &amp; GTVn). Structures were named per the American Association of Physicists in Medicine (AAPM) TG-263 recommendations, then retrieved in RT-STRUCT format. Matched patient, disease, treatment and outcomes data were obtained. Radiomics analysis was performed using an open-source institutionally-developed software that runs on Matlab platform. Links to these can be found in the related publication.<\/p><p>Note from the investigators: Some PET scans will include two PET AC files\u2014one includes the head &amp; neck portion of the exam, the other includes eyes-to-thighs. There is no file naming convention to distinguish between the two, so delineation may require the use of a DICOM viewer.<\/p><\/div><div class=\"tabs-pane \" id=\"339482408fd9040471bf43848819b5906d1a57d2\" name=\"Citations BITVOODOO_ANDamp; Data Usage Policy\" ><h3 id=\"RadiomicsoutcomepredictioninOropharyngealcancer-Citations&amp;DataUsagePolicy\">Citations &amp; Data Usage Policy\u00a0<\/h3><p><span>These collections are freely available to browse, download, and use for commercial, scientific and educational purposes as outlined in the\u00a0<\/span><a href=\"http:\/\/creativecommons.org\/licenses\/by\/3.0\/\" rel=\"nofollow\" class=\"external-link\">Creative Commons Attribution 3.0 Unported License<\/a><span>. <\/span> Questions may be directed to\u00a0<a class=\"external-link\" rel=\"nofollow\" href=\"mailto:help@cancerimagingarchive.net\">help@cancerimagingarchive.net<\/a>. Please be sure to acknowledge both this data set and TCIA in publications by including the following citations in your work:<\/p><div class=\"confluence-information-macro confluence-information-macro-information\"><p class=\"title\">Data Citation<\/p><span class=\"aui-icon aui-icon-small aui-iconfont-info confluence-information-macro-icon\"><\/span><div class=\"confluence-information-macro-body\"><p>Elhalawani H, White AL, Zafereo J, Wong AJ, Berends JE, AboHashem S, Williams B, Aymard JM, Kanwar A, Perni S, Mulder S, Rock CD, Grossberg A, Mohamed A, Gunn GB, Frank SJ, Rosenthal DI, Garden AS, Fuller CD;\u00a0 M.D. Anderson Cancer Center Head and Neck Quantitative Imaging Working Group (2018). <strong>Radiomics outcome prediction in Oropharyngeal cancer<\/strong> [Dataset]. The Cancer Imaging Archive. DOI: <a href=\"https:\/\/doi.org\/10.7937\/tcia.2020.2vx6-fy46\" class=\"external-link\" rel=\"nofollow\">10.7937\/TCIA.2020.2vx6-fy46<\/a><\/p><\/div><\/div><div class=\"confluence-information-macro confluence-information-macro-information\"><p class=\"title\">Publication Citation<\/p><span class=\"aui-icon aui-icon-small aui-iconfont-info confluence-information-macro-icon\"><\/span><div class=\"confluence-information-macro-body\"><p><span style=\"color: rgb(102,102,102);\">Elhalawani, H., Mohamed, A., White, A. <em>et al.<\/em> <strong>Matched computed tomography segmentation and demographic data for oropharyngeal cancer radiomics challenges<\/strong>. <em>Sci Data<\/em> <strong>4, <\/strong>170077 (2017). DOI: <a href=\"https:\/\/doi.org\/10.1038\/sdata.2017.77\" class=\"external-link\" rel=\"nofollow\">10.1038\/sdata.2017.77<\/a><\/span><\/p><\/div><\/div><div class=\"confluence-information-macro confluence-information-macro-information\"><p class=\"title\">TCIA Citation<\/p><span class=\"aui-icon aui-icon-small aui-iconfont-info confluence-information-macro-icon\"><\/span><div class=\"confluence-information-macro-body\"><p>Clark K, Vendt B, Smith K, Freymann J, Kirby J, Koppel P, Moore S, Phillips S, Maffitt D, Pringle M, Tarbox L, Prior F.\u00a0T<strong>he Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository<\/strong>, Journal of Digital Imaging, Volume 26, Number 6, December, 2013, pp 1045-1057. DOI: <a href=\"https:\/\/doi.org\/10.1007\/s10278-013-9622-7\" class=\"external-link\" rel=\"nofollow\">10.1007\/s10278-013-9622-7<\/a><\/p><\/div><\/div><p><span style=\"color: rgb(23,43,77);\"><strong>In addition to the dataset citation above, please be sure to cite the following if you utilize these data in your research:<\/strong><\/span><\/p><h3 id=\"RadiomicsoutcomepredictioninOropharyngealcancer-OtherPublicationsUsingThisData\">Other Publications Using This Data<\/h3><p><span>TCIA maintains<\/span><a rel=\"nofollow\" href=\"https:\/\/www.cancerimagingarchive.net\/publications\/\" class=\"external-link\"> a list of publications<\/a><span> that leverage TCIA data. <\/span> If you have a manuscript you'd like to add please<a rel=\"nofollow\" class=\"external-link\" href=\"http:\/\/www.cancerimagingarchive.net\/support\/\"> contact the TCIA Helpdesk<\/a>.<\/p><\/div><div class=\"tabs-pane \" id=\"3394824034d0ca9df53d4b9294ff4d01b5132597\" name=\"Versions\" ><h3 id=\"RadiomicsoutcomepredictioninOropharyngealcancer-Version2(Current)2022\/08\/02:\">Version 2 (Current) 2022\/08\/02:\u00a0<\/h3><div class=\"table-wrap\"><table class=\"confluenceTable\"><colgroup><col\/><col\/><\/colgroup><tbody><tr><th class=\"confluenceTh\">Data Type<\/th><th class=\"confluenceTh\">Download all or Query\/Filter<\/th><\/tr><tr><td class=\"confluenceTd\">Images - 814 series (DICOM, 51.6 GB)<\/td><td class=\"confluenceTd\"><div class=\"content-wrapper\"><p><br\/>\n\n<span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\">\n   <a href=\"https:\/\/wiki.cancerimagingarchive.net\/display\/DOI\/Radiomics+outcome+prediction+in+Oropharyngeal+cancer?preview=%2F33948240%2F70222837%2Fmanifest-1585330520084.tcia\" rel=\"nofollow\"><button class=\"tcia-btn tcia-download-color\"><i class=\"fa fa-cloud-download\" \/> Download<\/button><\/a>\u00a0\n<\/span><\/p><p class=\"auto-cursor-target\">(Download requires <span style=\"color: rgb(23,43,77);\"><a href=\"https:\/\/wiki.cancerimagingarchive.net\/display\/NBIA\/Downloading+TCIA+Images\" rel=\"nofollow\" style=\"text-decoration: underline;\">NBIA Data Retriever<\/a><\/span><span style=\"color: rgb(23,43,77);\">)<\/span><\/p><\/div><\/td><\/tr><tr><td class=\"confluenceTd\">Clinical Data (CSV, 86 kB)<\/td><td class=\"confluenceTd\"><div class=\"content-wrapper\"><p>\n\n<span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\">\n   <a href=\"https:\/\/wiki.cancerimagingarchive.net\/display\/DOI\/Radiomics+outcome+prediction+in+Oropharyngeal+cancer?preview=%2F33948240%2F133071076%2FRadiomics_Outcome_Prediction_in_OPC_ASRM_corrected.csv\" rel=\"nofollow\"><button class=\"tcia-btn tcia-download-color\"><i class=\"fa fa-cloud-download\" \/> Download<\/button><\/a>\u00a0\n<\/span><\/p><\/div><\/td><\/tr><\/tbody><\/table><\/div><p>Corrected version of the clinical data CSV attached, because the investigators noticed an error in some of the durations of the endpoints including the overall survival, local and regional control, and freedom from distant metastasis. The original excel sheet had errors because the formulas to calculate the duration for patients with events were not applied so we fixed this error and now all the durations are correct.<\/p><h3 id=\"RadiomicsoutcomepredictioninOropharyngealcancer-Version1:2020\/03\/31\">Version 1: 2020\/03\/31<\/h3><div class=\"table-wrap\"><table class=\"wrapped fixed-width confluenceTable\" style=\"width: 33.5319%;\"><colgroup><col style=\"width: 46.4413%;\"\/><col style=\"width: 53.5587%;\"\/><\/colgroup><tbody><tr><th class=\"confluenceTh\">Data Type<\/th><th class=\"confluenceTh\">Download all or Query\/Filter<\/th><\/tr><tr><td class=\"confluenceTd\">Images - 814 series (DICOM, 51.6 GB)<\/td><td class=\"confluenceTd\"><div class=\"content-wrapper\"><p><br\/>\n\n<span class=\"confluence-embedded-file-wrapper confluence-embedded-manual-size\">\n   <a href=\"https:\/\/wiki.cancerimagingarchive.net\/display\/DOI\/Radiomics+outcome+prediction+in+Oropharyngeal+cancer?preview=%2F33948240%2F70222837%2Fmanifest-1585330520084.tcia\" rel=\"nofollow\"><button class=\"tcia-btn tcia-download-color\"><i class=\"fa fa-cloud-download\" \/> Download<\/button><\/a>\u00a0\n<\/span><\/p><p class=\"auto-cursor-target\">(Download requires <span style=\"color: rgb(23,43,77);\"><a style=\"text-decoration: underline;\" rel=\"nofollow\" href=\"https:\/\/wiki.cancerimagingarchive.net\/display\/NBIA\/Downloading+TCIA+Images\">NBIA Data Retriever<\/a><\/span><span style=\"color: rgb(23,43,77);\">)<\/span><\/p><\/div><\/td><\/tr><tr><td class=\"confluenceTd\">Clinical Data (CSV, 79 kB)<\/td><td class=\"confluenceTd\"><div class=\"content-wrapper\"><p>(download deprecated)<\/p><\/div><\/td><\/tr><\/tbody><\/table><\/div><\/div><\/div><\/div><\/div>","make_new_version_button":"","related_collections":false,"result_doi":"10.7937\/TCIA.2020.2vx6-fy46","versions":false,"cancer_locations":false,"publications_related":"","result_download_info":"Some data in this collection contains images that could potentially be used to reconstruct a human face.  To safeguard the privacy of participants, users must sign and submit a <a href=\"https:\/\/wiki.cancerimagingarchive.net\/download\/attachments\/4556915\/TCIA%20Restricted%20License%2020220519.pdf?version=1&amp;modificationDate=1652964581655&amp;api=v2\">TCIA Restricted License Agreement<\/a> to <a href=\"mailto:help@cancerimagingarchive.net\">help@cancerimagingarchive.net<\/a> before accessing the data.\n\nPlease contact <a href=\"mailto:help@cancerimagingarchive.net\">help@cancerimagingarchive.net<\/a>\u00a0 with any questions regarding usage.","result_downloads":[5391,5392],"result_page_accessibility":"Public","version_change_log_archived":"","additional_resources":"","date_updated":"2023-09-13","publications_using":"TCIA maintains<a href=\"https:\/\/www.cancerimagingarchive.net\/publications\/\"> a list of publications<\/a> that leverage TCIA data.  If you have a manuscript you'd like to add please<a href=\"http:\/\/www.cancerimagingarchive.net\/support\/\"> contact the TCIA Helpdesk<\/a>.","result_title":"Radiomics outcome prediction in Oropharyngeal cancer","subjects":[],"detailed_description":"<em><u>Methods<\/u><\/em>\nDiagnostic contrast-enhanced computed tomography (CECT) Digital Imaging and Communications in Medicine (DICOM) files prior to any active intervention were collected for 495 OPC patients treated at our institution between 2005 and 2012<strong>. <\/strong>Expert radiation oncologists manually segmented primary and nodal disease gross volumes (GTVp &amp; GTVn). Structures were named per the American Association of Physicists in Medicine (AAPM) TG-263 recommendations, then retrieved in RT-STRUCT format. Matched patient, disease, treatment and outcomes data were obtained. Radiomics analysis was performed using an open-source institutionally-developed software that runs on Matlab platform. Links to these can be found in the related publication.\nNote from the investigators: Some PET scans will include two PET AC files\u2014one includes the head &amp; neck portion of the exam, the other includes eyes-to-thighs. There is no file naming convention to distinguish between the two, so delineation may require the use of a DICOM viewer.","result_short_title":"Radiomics outcome prediction in Oropharyngeal cancer","supporting_data":false,"version_change_log":"","collections":"","result_browse_title":"","version_number":[],"collection_downloads":false,"result_summary":"This study describes a subset of the <a href=\"https:\/\/wiki.cancerimagingarchive.net\/display\/Public\/HNSCC\">HNSCC<\/a>\u00a0collection on TCIA.\u00a0 \nThere is an unmet need for integrating quantitative imaging biomarkers into current risk stratification tools and\u00a0to explore the correlation between radiomics features \u2013alone or in combination with clinical prognosticators- and tumor outcome.\u00a0 Clinical meta-data and matched baseline contrast-enhanced computed tomography (CECT) scans were used to build a\u00a0cohort of 495 oropharyngeal cancer (OPC) patients\u00a0treated\u00a0between 2005 and 2012.\u00a0\u00a0Expert radiation oncologists manually segmented primary and nodal disease gross volumes (GTVp &amp; GTVn). Structures were named per the American Association of Physicists in Medicine (AAPM) TG-263 recommendations, then retrieved in RT-STRUCT format. Matched patient, disease, treatment and outcomes data were obtained. Radiomics analysis was performed using an open-source institutionally-developed software that runs on Matlab platform.\u00a0 <br\/>\nA related dataset is here: <strong>Data from Head and Neck Cancer CT Atlas<\/strong>. DOI: <a href=\"http:\/\/doi.org\/10.7937\/K9\/TCIA.2017.umz8dv6s\">10.7937\/K9\/TCIA.2017.umz8dv6s<\/a>","result_featured_image":false,"result_acknowledgements":"This research was supported by the Andrew Sabin Family Foundation; Dr. Fuller is a Sabin Family Foundation Fellow. Drs. Mohamed and Fuller receive funding support from the National Institutes of Health (NIH)\/National Institute for Dental and Craniofacial Research (NIDCR) (R01DE025248) and the National Institutes of Health (NIH)\/National Cancer Institute (NCI) (1R01CA214825-01). \nDr. Fuller received\/(s) grant and\/or salary support from the NIH\/NCI Head and Neck Specialized Programs of Research Excellence (SPORE) Developmental Research Program Career Development Award (P50CA097007-10); the NCI Paul Calabresi Clinical Oncology Program Award (K12 CA088084-06); a General Electric Healthcare\/MD Anderson Center for Advanced Biomedical Imaging In-Kind Award;\u00a0 an Elekta AB\/MD Anderson Department of Radiation Oncology Seed Grant; the Center for Radiation Oncology Research (CROR) at MD Anderson Cancer Center Seed Grant; the MD Anderson Institutional Research Grant (IRG) Program; and the NIH\/NCI Cancer Center Support (Core) Grant CA016672 to The University of Texas MD Anderson Cancer Center (P30 CA016672). \nDr. Elhalawani was directly funded in part by a philanthropic gift from the Family of Paul W. Beach given to Dr. Gunn for patient-outcome database construction.\n<br\/>","hide_from_browse_table":[],"_links":{"self":[{"href":"https:\/\/cm.vastapps.dev\/api\/v1\/analysis-results\/5762"}],"collection":[{"href":"https:\/\/cm.vastapps.dev\/api\/v1\/analysis-results"}],"about":[{"href":"https:\/\/cm.vastapps.dev\/api\/wp\/v2\/types\/tcia_analysis_result"}],"wp:attachment":[{"href":"https:\/\/cm.vastapps.dev\/api\/wp\/v2\/media?parent=5762"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}